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Introduction and Overview of General Microbiology Lecture 1 What is Microbiology?. In Microbiology- We Study “Microbes”. What are microbes? Micro- means small… By definition, we study small organisms… those that we cannot see with the naked eye…. (limit of resolution of eye = 0.2 mm).
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Introduction and Overview of General Microbiology Lecture 1 What is Microbiology?
In Microbiology- We Study “Microbes” What are microbes? Micro- means small… By definition, we study small organisms… those that we cannot see with the naked eye…. (limit of resolution of eye = 0.2 mm)
Biological Classification: The Five Kingdoms (Whittaker) (based on morphological features) Uni or multicellular Eukaryotic Eukaryotic Unicellular Bacteria Archaea Prokaryotic Unicellular
Eukarya (Eu)Bacteria Archaea (Make up other 4 Kingdoms) (Makes up 1 Kingdom – Monera) Biological Classification Today – 3 Domain (Superkingdoms) System (Woese) (Based mainly on a gene sequence (DNA))
Binomial Nomenclature • Carolus (Carl) Linnaeus – 1750’s – probably not the first person to do this but certainly made it popular and acceptable Homo sapiens – Homo is the genus (pl. genera), name can only be used once… always capitalized sapiens – species epithet… never capitalized and can be used many times Both the genus and species epithet make up the “species” name
What organisms do Microbes include? • 1) Bacteria (Prokaryotes) • 2) Viruses • 3) Fungi (yeasts, molds) • 4) Protista (protozoans) • 5) Algae • 6) Helminths
2) Protista Eukaryotic Most Unicellular 1) Bacteria (Eu)bacteria Archaea Archeabacteria Prokaryote Unicellular 3) Fungi Eukaryotic Uni- or multicellular
4) Helminths Multicellular eukaryotes Roundworms Flatworms 5) Viruses Alive? Organisms? Neither prokaryotic or Eukaryotic… 6)Algae Many are microscopic We are really talking about Eukaryotic Types
Types of Microorganisms • Prokaryotes = Bacteria • Unicellular organisms • No compartmentalization • No organelles • No nucleus • Cell wall • All reproduce by binary fission or budding • Ribosomes • Plasma membrane • Circular DNA chromosome • Plasmids Small in size 1000 X magnification 200 nm to 1 mm Tremendous diversity
Prokaryotes 2 Main Groups More in Chapter 4 1) Bacteria or Eubacteria (“True” Bacteria) Non-archaea prokaryotes Most have Peptidoglycan in the cell wall 2) Archaea Possibly Ancient (hence the name) Different structure & physiologies Harsh environments Extremophiles No peptidoglycan in their cell wall
Main Types of Bacteria • Four main types - based on morphology (shape) coccus (sphere-shaped) bacillus (rod-shaped) (pl. cocci) strep- staph- and diplo- (pl. bacilli) (sub-categories do exist (cocco-bacilli, vibrios)) spirillum (pl. spirilla) helical – flattened “s”-shaped non-flexible cell wall spirochete (corkscrew shaped) (flexible cell wall)
Protista • Eukaryotic microbes • Most are unicellular • Have no cell wall - only plasma membrane • May have pellicle • Most are motile - distinguished by type of motility • Pseudopods - cytoplasmic extensions, “false foot” • (amoebas) • Flagella - “whip like” propellers (flagellates) • Cilia - short hair-like structures coating entire surface • (ciliates)
Fungi • Eukaryotic organisms, extensive subcellular • compartmentalization • Can be single or multicellular organisms (yeasts mold hyphae) • Cell wall is composed of chitin • Can replicate either asexually (binary fission) or • sexually (mating) • Obtain nutrients from surroundings • Parasites or saprophytes
Types of Fungi Multi-cellular (Molds) Penicillium Unicellular (Yeast) Saccharomyces cerevisiae Multi-cellular Mushrooms
Algae • Can be either unicellular or multicellular • Photosynthetic eukaryotes • Cellulose cell wall • Exist in many environments (water and land) • Photoautotrophs • Consumed by animals as food
Viruses • Acellular • Simple virus • Capsid (protein) • Nucleic acid (DNA or RNA) Electron microscope 10 nm – 200 nm
History of Microbiology • Two major pioneers… • Antonie van Leeuwenwoek – • first to visualize bacteria- created the “simple” microscope (1660’s) • Robert Hooke – devised the “compound” microscope (1660’s) and coined the term “cell” • This turned out to be the beginning of the end of “spontaneous generation” (superstition)
Spontaneous Generation • Life arising from dead matter • Maggots would “appear” on spoiled meat • Fungi, insects, millipedes, and snakes found in rotten logs • Was believed life spontaneously generated from the • decomposing food
Several Days Later First Evidence Against “Spontaneous Generation” (life from non-life) Francesco Redi - 1668 Maggots only appeared if flask was open! Spoiled Meat Did not exclude the possibility of spontaneous generation of bacteria
Proponents of Spontaneous Generation Battle Back! • John Needham’s broth experiments - 1745 • Boiled broth was devoid of life • Days later - teeming with microorganisms • Argued that microbes could arise spontaneously from • non-living mater • Lazzaro Spallanzani’s modification - 1765 • Only uncovered broth contained microorganisms • Proponents argued that fresh air was required
The Final Blow to the “Spontaneous Generation” Hypothesis • Louis Pasteur - 1861
Significant Advances in Microbiology • 1864 - Fermentation and Pasteurization - Louis Pasteur • Discovered source of fermentation • Yeast convert sugar to alcohol • Bacteria cause spoiling - convert alcohol to vinegar • Found heating perishables prevented spoiling – kills • bacteria
Significant Advances in Microbiology • 1876 - The Germ Theory of Disease proved correct • Robert Koch developed “Koch’s Postulates” (4) • Anthrax decimating cattle industry • 1) Find evidence of a microbe in all infected individuals • 2) Isolate rod-shaped bacterium from infected individual • 3) Introduce bacterium to healthy individual and get same disease • 4) Can reisolate the same bacterium from diseased individuals
Significant Advances in Microbiology • 1796 - First successful vaccination - Edward Jenner • Smallpox epidemics prevalent • Cowpox caused similar disease in cattle – mild • disease in humans • Jenner found infecting humans with cowpox • protected against smallpox infection • Due to antigenic similarity between two viruses (body recognizes these viruses as the same in some ways)
Significant Advances in Microbiology • 1928 - Discovery of Antibiotics - Alexander Flemming • Plate contaminated with • Penicillium • Zone of inhibition • Killed Streptococcus • Called substance penicillin
Fields of Microbiology • Bacteriology - study of bacteria (includes Bacteria and Archaea) • Mycology - study of fungi • Parasitology - study of parasitic protozoa and worms • Virology - study of viruses • Immunology - study of the host response to infection • Protozoology – general study of protozoa • Algalogy – study of algae (for some might include cyanobacteria)