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MATH 685/CSI 700 Lecture Notes. Lecture 1. Intro to Scientific Computing. Useful info . Course website: http://math.gmu.edu/~memelian/teaching/Spring10 MATLAB instructions: http://math.gmu.edu/introtomatlab.htm Mathworks, the creator of MATLAB: http://www.mathworks.com
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MATH 685/CSI 700 Lecture Notes Lecture 1. Intro to Scientific Computing
Useful info • Course website: http://math.gmu.edu/~memelian/teaching/Spring10 • MATLAB instructions: http://math.gmu.edu/introtomatlab.htm • Mathworks, the creator of MATLAB: http://www.mathworks.com • OCTAVE = free MATLAB clone Available for download at http://octave.sourceforge.net/
Scientific computing • Design and analysis of algorithms for numerically solving mathematical problems in science and engineering • Deals with continuous quantities vs. discrete (as, say, computer science) • Considers the effect of approximations and performs error analysis • Is ubiquitous in modern simulations and algorithms modeling natural phenomena and in engineering applications • Closely related to numerical analysis
Mathematical modeling Computational problems:attack strategy • Develop mathematical model (usually requires a combination of math skills and some a priori knowledge of the system) • Come up with numerical algorithm (numerical analysis skills) • Implement the algorithm (software skills) • Run, debug, test the software • Visualize the results • Interpret and validate the results
Computational problems:well-posedness • The problem is well-posed, if (a) solution exists (b) it is unique (c) it depends continuously on problem data The problem can be well-posed, but still sensitive to perturbations. The algorithm should attempt to simplify the problem, but not make sensitivity worse than it already is. Simplification strategies: Infinite finite Nonlinear linear High-order low-order Only approximate solution can be obtained this way!
Sources of numerical errors • Before computation • modeling approximations • empirical measurements, human errors • previous computations • During computation • truncation or discretization • Rounding errors • Accuracy depends on both, but we can only control the second part • Uncertainty in input may be amplified by problem • Perturbations during computation may be amplified by algorithm Abs_error = approx_value – true_value Rel_error = abs_error/true_value Approx_value = (true_value)x(1+rel_error) Cannot be controlled Can be controlled through error analysis
Computational error: affected by algorithm + Propagated data error: not affected by algorithm Sources of numerical errors • Propagated vs. computational error • x = exact value, y = approx. value • F = exact function, G = its approximation • G(y) – F(x) = [G(y) - F(y)] + [F(y) - F(x)] • Rounding vs. truncation error • Rounding error: introduced by finite precision calculations in the computer arithmetic • Truncation error: introduced by algorithm via problem simplification, e.g. series truncation, iterative process truncation etc. Total error = Computational error = Truncation error + rounding error
Backward error analysis • How much must original problem change to give result actually obtained? • How much data error in input would explain all error in computed result? • Approximate solution is good if it is the exact solution to a nearby problem • Backward error is often easier to estimate than forward error
Conditioning • Well-conditioned (insensitive) problem: small relative change in input gives commensurate relative change in the solution • Ill-conditioned (sensitive): relative change in output is much larger than that in the input data • Condition number = measure of sensitivity • Condition number = |rel. forward error| / |rel. backward error| = amplification factor
Stability • Algorithm is stable if result produced is relatively insensitive to perturbations during computation • Stability of algorithms is analogous to conditioning of problems • From point of view of backward error analysis, algorithm is stable if result produced is exact solution to nearby problem • For stable algorithm, effect of computational error is no worse than effect of small data error in input
Accuracy • Accuracy : closeness of computed solution to true solution of problem • Stability alone does not guarantee accurate results • Accuracy depends on conditioning of problem as well as stability of algorithm • Inaccuracy can result from applying stable algorithm to ill-conditioned problem or unstable algorithm to well-conditioned problem • Applying stable algorithm to well-conditioned problem yields accurate solution
Normalized representation Not all numbers can be represented this way, those that can are called machine numbers
Rounding rules • If real number x is not exactly representable, then it is approximated by “nearby” floating-point number fl(x) • This process is called rounding, and error introduced is called rounding error • Two commonly used rounding rules • chop: truncate base- expansion of x after (p − 1)st digit; also called round toward zero • round to nearest : fl(x) is nearest floating-point number to x, using floating-point number whose last stored digit is even in case of tie; also called round to even • Round to nearest is most accurate, and is default rounding rule in IEEE systems