1 / 1

Amino acid position in ORF

ORF1. ORF2. ORF3. Characterization of the complete genome of a novel citrivirus infecting Actinidia chinensis. Archives of Virology Ramesh R. Chavan 1 , Arnaud G. Blouin 2 , Daniel Cohen 2 and Michael N. Pearson 1

romney
Download Presentation

Amino acid position in ORF

An Image/Link below is provided (as is) to download presentation Download Policy: Content on the Website is provided to you AS IS for your information and personal use and may not be sold / licensed / shared on other websites without getting consent from its author. Content is provided to you AS IS for your information and personal use only. Download presentation by click this link. While downloading, if for some reason you are not able to download a presentation, the publisher may have deleted the file from their server. During download, if you can't get a presentation, the file might be deleted by the publisher.

E N D

Presentation Transcript

  1. ORF1 ORF2 ORF3 Characterization of the complete genome of a novel citrivirus infecting Actinidia chinensis. Archives of Virology Ramesh R. Chavan1, Arnaud G. Blouin2, Daniel Cohen2 and Michael N. Pearson1 1School of Biological Sciences, The University of Auckland, Private Bag 92019, Auckland, New Zealand 2Institute of Plant & Food Research, Private Bag 92169, Auckland, New Zealand Corresponding author: m.pearson@auckland.ac.nz A ORF2 ORF3 ORF1 B Amino acid position in ORF Online resource 2 Comparison between the nucleotide and amino acid sequences of citrus and Actinidiaisolates of Citrus leaf botch virus (CLBV).AJ318061 was used as the reference sequence and was compared with 3 other citrus isolates (FJ009377, EU857539 and EU857540) and Actinidia isolate M3A (JN900477)..At the top of the plots is a diagrammatic representation of the genome structure of CLBV. (A) Similarity plot of genomic nucleotide sequences generated using SimPlot v3.5.1 [16] with a window size of 200 nuc. and a step size of 20 nucleotides. (B) Similarity plots of the amino acid sequences of ORF1, ORF2 and ORF3 generated using SimPlot with a window size of 40 aa and a step size of 10 aa.

More Related