'Marker data' presentation slideshows

Association Mapping

Association Mapping. LD. Definition. Causes. Haplotype Blocks. Extent of LD. Recombination Hotspots. Marker Density. Breeding System. Candidate loci or whole genome?. Species. Regression. Sub-population structure. Multiple testing vs. Shrinkage. Model-based or PCA?.

1.29k views • 90 slides

Bayesian Estimators of Time to Most Recent Common Ancestry

Bayesian Estimators of Time to Most Recent Common Ancestry. Bruce Walsh. jbwalsh@u.arizona.edu. Ecology and Evolutionary Biology. Adjunct Appointments Molecular and Cellular Biology Plant Sciences Epidemiology & Biostatistics Animal Sciences. Definitions.

654 views • 56 slides

QTL Mapping Using Mx

QTL Mapping Using Mx. Michael C Neale. Virginia Institute for Psychiatric and Behavioral Genetics Virginia Commonwealth University. Overview. Alternative approach Linkage as Mixture Univariate/Multivariate One/more loci Practical considerations Power Pihat vs covs Larger Sibships.

459 views • 34 slides

Updates to the Cool Season Food Legume Genome Database

Updates to the Cool Season Food Legume Genome Database. Dorrie Main, Chun- Huai Cheng, Rebecca McGee, Clarice Coyne, Stephen Ficklin , Taein Lee, Sook Jung, Marwa Sanad , Ping Zheng , Yu Ma, Keithanne Mockaitis NAPIA Meeting , October 31st, 2013. Outline. Introduction

465 views • 34 slides

QTL Mapping Using Mx

QTL Mapping Using Mx. Michael C Neale. Virginia Institute for Psychiatric and Behavioral Genetics Virginia Commonwealth University. Overview. Alternative approach Linkage as Mixture Univariate/Multivariate One/more loci Practical considerations Power Pihat vs covs Larger Sibships.

381 views • 34 slides

Motion Capture: Hardware & Workflow

Motion Capture: Hardware & Workflow. Rama Hoetzlein, 2011 Lecture Notes Aalborg University at Copenhagen. Hardward for Motion Capture. 1. Passive optical 2. Active optical 3. Time modulated active 4. Markerless 5. Non-optical: mechnical, magnetic. Passive Optical Capture.

276 views • 27 slides

Motion Capture: Hardware & Workflow

Motion Capture: Hardware & Workflow. Rama Hoetzlein, 2011 Lecture Notes Aalborg University at Copenhagen. Hardward for Motion Capture. 1. Passive optical 2. Active optical 3. Time modulated active 4. Markerless 5. Non-optical: mechnical, magnetic. Passive Optical Capture.

304 views • 27 slides

Outline

The Cool Season Food Legume Database: An Integrated Resource for Basic, Translational and Applied Research. Dorrie Main, Chun-Huai Cheng, Stephen Ficklin, Marwa Sanad, Sook Jung, Taein Lee, Ping Zheng, Clarice Coyne, Rebecca McGee and Keithanne Mockaitis. Outline. Introduction

277 views • 27 slides

QTL mapping

558 views • 26 slides

More Powerful Genome-wide Association Methods for Case-control Data

More Powerful Genome-wide Association Methods for Case-control Data. Robert C. Elston, PhD Case Western Reserve University Cleveland Ohio. Kim S, Morris NJ, Won S, Elston RC Genetic Epidemiology, in press.

401 views • 23 slides

Software for Incorporating Marker Data in Genetic Evaluations

Software for Incorporating Marker Data in Genetic Evaluations. Kathy Hanford U.S. Meat Animal Research Center Agricultural Research Service U.S. Department of Agriculture. Outline. Introduction Mixed Models Incorporating Random QTL Effects Current/Future Modification to MTDFREMLQ

361 views • 21 slides

Mapping a trait

Mapping a trait. Types of trait: Monogenic Polygenic-Quantitative-continuous QT are the cumulative effect of many genes and are environment dependent . Mapping a Quantitative trait:. Select a trait of interest Chose contrasting parents Develop mapping population

487 views • 18 slides

Maps and Markers

Maps and Markers. Gramene SAB Report Jan 2006. CMap Improvements. Expanded, reorganized and hidden menus New map glyphs Number of features Crop map Magnify map Improved comparative map selection Filtering of features Collapse overlapping features Correspondence aggregation.

377 views • 14 slides