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OGCE Workflow Suite

OGCE Workflow Suite. Gopi Kandaswamy Suresh Marru Srinath Perera Chathura Herath Marlon Pierce. TeraGrid 2008. Workflow Suite. Generic Service Toolkit Tool to wrap command-line applications as web services Handles file staging & job submissions

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OGCE Workflow Suite

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  1. OGCE Workflow Suite Gopi Kandaswamy Suresh Marru Srinath Perera Chathura Herath Marlon Pierce TeraGrid 2008

  2. Workflow Suite • Generic Service Toolkit • Tool to wrap command-line applications as web services • Handles file staging & job submissions • Extensible runtime for security, resource brokering & urgent computing • Generic Factory service for on-demand creation of application services • XRegistry • Information repository for the OGCE workflow suite • Register, search, retrieve & share XML documents • User & hierarchical group based authorization • XBaya • GUI based tool to compose & monitor workflows • Extensible support for compiler plug-ins like BPEL & Jython OGCE TeraGrid08 Tutorial

  3. Features • Security • Authentication and authosrization • Secure invocations between services • Support for gateway community accounts • Support for multiple user accounts • Reliability • Retry job submissions and file staging • Fault Tolerance and Recovery service • Over-provisioning and migration • Compatibility • Taverna, Kepler and Trianna OGCE TeraGrid08 Tutorial

  4. Applications • LEAD • Lower entry barrier to using weather analysis tools • Improve detection, analysis & prediction of mesoscale weather • Motif-Network • Transformation of sequenced genomes to “domain-space” • Cyber-Infrastructure Evaluation • Performance evaluation of future supercomputer architectures • ADAM • Algorithms for feature extraction, data normalization, classification and normalization OGCE TeraGrid08 Tutorial

  5. LEAD: A Weather Forecasting Workflow (1/2) Terrain data files 3D Model Data Interpolator (lateral Boundary Conditions) NAM, RUC, GFS data 9 3 1 3D Model Data Interpolator (Initial Boundary Conditions) Terrain Preprocessor Surface data, upper air mesonet data and wind profiler data 11 15 2 ARPS to WRF Data Interpolator WRF Static Preprocessor IDV 4 88D Radar Re-mapper 7 Surface, terrestrial data files WRF WRF 10 ADAS WRF ARPS Ensemble Generator WRF 12 Radar data (Level II) Run once per forecast region 5 13 NIDS Radar Re-mapper 8 WRF to ARPS Data Interpolator Radar data (Level III) ADAM Visualization on users request Satellite data 6 Satellite Data Re-mapper 14 Repeat periodically for new data ARPS Plotting Program Data mining: look for storm signature Triggered if a storm is detected Static data Real time data Initialization Forecast Visualization Analysis Data Mining

  6. LEAD: A Weather Forecasting Workflow (2/2) WRF-Static running on Tungsten OGCE TeraGrid08 Tutorial

  7. Ensemble-type processing (minimal network reqs) Capacity-type computing Parallel processing Capability-type computing Motif-Network: Whole Genome workflow • Domain webs of large genomes • Input list of amino acid sequences • Identify all known domains • Construct webs Jeff Tilson, RENCI OGCE TeraGrid08 Tutorial

  8. CI: Execute Sub-Workflow • Input a campaign step filename • Execute GAMESS per step specification Jeff Tilson, RENCI OGCE TeraGrid08 Tutorial

  9. More Information OGCE TeraGrid08 Tutorial

  10. Questions? OGCE TeraGrid08 Tutorial

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