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Generating Consensus Syndrome Case Definitions. September 24-25, 2007 Pittsburgh, PA. Hosted by Wendy Chapman and John Dowling Funded by ISDS.
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Generating Consensus Syndrome Case Definitions September 24-25, 2007 Pittsburgh, PA Hosted by Wendy Chapman and John Dowling Funded by ISDS
ObjectiveGenerate explicit consensus syndrome definitions based on current syndromic surveillance practiceRespiratoryGastrointestinalFever/Constitutional/ILI
Overview • Purpose of meeting • Baseline consensus syndromes • Coming to Consensus • Consensus Definitions • Future goals
Clinical Condition experienced by a patient Admission complaint “cough/headache” (Preprocess)Classify Complaint Classifier Clinical Condition Concept Syndrome Category Respiratory Neurological Cough (C00529) Headache (C00421)
Purpose of Meeting Aim 1 • Catalogue and characterize existing chief complaint classifiers and the syndromic categories they map to Aim 2 • Develop consensus syndrome categories and definitions, using the catalogue of existing definitions as a starting point
Possible Uses for Standardized Consensus Syndromic Definitions Research • Compare chief complaint classifiers against each other using standard definitions • Generate a list of clinical conditions important for surveillance • Target for NLP systems to extract from reports • Generate a standardized list of conditions that can be validated for predictive power • Develop a set of chief complaints with standardized annotations for research and development Public Health • Provide a catalogue of what real systems across the country are surveilling • Provide a benchmark for comparing different syndrome definitions against each other • Examination • Research/validation studies
Generating Consensus Syndromes Before the meeting • Compiled syndrome definitions from ten surveillance systems • Clinical conditions mapped to syndromes • Counted how many times each condition occurred with each syndrome • Removed conditions that did not meet inclusion criteria • Discussed • which syndromes to include in reference • which clinical conditions comprise each syndrome
Characterize Currently Used Syndromic Definitions • Collated condition-syndrome maps for 10 syndromic surveillance systems • RODS • BioPortal (Arizona) • Seattle, King County • Biosense • NCDetect • Aegis (Harvard) • Essence • New York State • Boston Public Health Dept • New York City
Created a union of all syndromes(Respiratory, GI, Fever/Constitutional/ILI, Neurological) • Merged identical syndromes together System 1: Respiratory System 2: Respiratory, Upper Resp, Lower Resp System 3: Respiratory
Inclusion Criteria for Clinical Conditions • Conditions can be signs, symptoms, findings, or diagnoses • Conditions should comprise a single problem • Cough—not cough/SOB • Conditions should be those that a patient may present with at an acute care visit • Conditions should be reasonably described in admit complaints • Conditions should be directly related to the organ system
Filtered and sorted clinical conditions indicating each syndrome • From an initial list of 91 conditionsCCC-EDS (Thompson) • If anyone used condition • Keep the condition in current list • For additional conditions • If condition did not exist in current list • Add new condition OR • Leave condition out Why: Signs, symptoms not in CCC-EDS General diagnoses Added: Bronchitis Influenza Chills Pleural effusion
Filtered and sorted clinical conditions indicating each syndrome • Created an initial list of 91 conditionsCCC-EDS (Thompson) • If anyone used condition • Keep the condition in current list • For additional conditions • If condition did not exist in current list • Add new condition OR • Leave condition out Not Added: Crohn’s Disease Diverticulitis Pulmonary Infection Why: Specific diagnoses Broad bins
59 of 91 CCC-EDS conditions were used 78 new conditions added 31 conditions considered synonyms (not added) 36 additional conditions not added 136 total conditions
Counted frequency of each condition for each syndrome in combined list Maximum Frequency 10 – Respiratorycough, breathing difficulty, coughing up blood Number of Singletons 128
Pittsburgh MeetingSeptember 24-25, 2007 • 18 participants • 13 attended • Set guidelines for syndrome definition generation • purpose for syndrome definitions • Viewed baseline syndromes • Argued about • Which syndromes to include • Which conditions to include
Craig Hales Carol Sniegoski Karen Olson Jeremy Espino Cathy Larson Mikaela Keller Lori Hutwagner David Thompson Dennis Cochrane Marc Paladini Julia Gunn Atar Baer Bill Lober Matt Schoeler John Dowling Rebecca Noe Peter Elkin Wendy Chapman Participants
Who are we to generate reference definitions? Will we accomplish anything or just argue? Will one person be headstrong and not agree with the rest? Am I overlooking anybody? Will they like Pittsburgh?
Syndrome Definition purpose To assist public health in monitoring, characterizing, detecting, and responding to changes in population health based on patients’ initial clinical presentation of acute outbreaks and exposures
What Syndromes Do People Use? Respiratory Resp Upper Lower Asthma Cold 10 1 1 2 1 Ten surveillance systems Gastrointestinal GI Abd Pain Bloody Diarrhea Diarrhea Vomiting 9 1 1 2 2 Constitutional Const Febrile ILI FeverFlu Sepsis 4 4 2 1 1 Neurological Neurological Meningoencephalitis Shock_coma 8 3 1
Reference Syndrome Definitions • Focused on three syndromes • Respiratory • GI • Constitutional/ILI • Solution to many arguments • Create a sensitive and a specific syndrome • Respiratory (sensitive, specific) • GI (sensitive, specific) • Create two syndromes (similar to sens and spec) • Constitutional • ILI 6 consensus reference syndrome definitions
48 conditions 26 16 Sensitive Specific Respiratory Syndrome Clinical Condition Sens Spec BREATHING DIFFICULTY 1 1 COUGH 1 1 HEMOPTYSIS 1 1 ASTHMA ATTACK 1 1 CROUP 1 1 PNEUMONIA 1 1 WHEEZING 1 1 RUNNY OR STUFFY NOSE 1 0 PLEURITIC PAIN 1 0 SORE THROAT 1 0 URI 1 0 …
25 conditions 6 3 Sensitive Specific GI Syndrome Clinical Condition Sens Spec ABDOMINAL PAIN 1 0 DIARRHEA 1 1 VOMITING 1 1 NAUSEA 1 0 GASTROENTERITIS 1 1 DEHYDRATION 1 0
32 conditions 12 Constitutional Syndrome IRRITABLE BABY FEVER WEAKNESS ANOREXIA VIRAL SYNDROME FAINTNESS MALAISE BODY ACHES GENERAL ILLNESS CHILLS LYMPHADENOPATHY SWEATING
17 conditions 12 Influenza-like Illness Syndrome COUGH SORE THROAT FEVER WEAKNESS VIRAL SYNDROME BODY ACHES BRONCHIOLITIS PNEUMONIA UPPER RESPIRATORY INFECTION MALAISE CHILLS INFLUENZA
Reasons for Excluding a Condition • Not specific to the organ system • Fever in Respiratory • Not systemic • Headache in Constitutional • Not specific enough to a disease of interest • Abdominal Pain in Specific Gastrointestinal • Not the primary presentation of a significant illness • Earache in Specific Respiratory • A related concept or synonym to another concept • LLQ Abdominal pain
Future • Post syndrome definitions on ISDS Wiki Add • Related concepts/synonyms • Localized textual variants • Linguistic variants • Write paper on the meeting and on the definitions • Begin collaborative research studies • Anyone want to collaborate? • Generate repository of chief complaints • Generate annotations into syndrome definitions