560 likes | 764 Views
Viruses. Prof. Khaled H. Abu-Elteen Hashemite University. Viruses. smallest infections agents intracellular parasites-can reproduce only in host cells. can not carry on independent metabolism first virus discovered was tobacco mosaic virus [TMV] in 1892.
E N D
Viruses Prof. Khaled H. Abu-Elteen Hashemite University
Viruses • smallest infections agents • intracellular parasites-can reproduce only in host cells. • can not carry on independent metabolism • first virus discovered was tobacco mosaic virus [TMV] in 1892. • in 1931 virus cultured in the lab using tissue culture. • viruses are not cellular • consist only of a nucleic acid either DNA or RNA, surrounded by a protein coat.
Virus facts • generally more resistant to some disinfectants than most bacteria. • most are susceptible to heat, except hepatitis virus • not affected by antibiotics
VIRUS STRUCTURE • Basic rules of virus architecture, structure, and assembly are the same for all families, some structures are much more complex than others. • The capsid (coat) protein is the basic unit of structure; functions that may be fulfilled by the capsid protein are to: • Protect viral nucleic acid • Interact specifically with the viral nucleic acid for packaging • Interact with vector for specific transmission • Interact with host receptors for entry to cell • Allow for release of nucleic acid upon entry into new cell • Assist in processes of viral and/or host gene regulation
Nucleoprotein has two basic structure types: • HELICAL:Rod shaped, varying widths and specific architectures; no theoretical limit to the amount of nucleic acid that can be packaged • CUBIC (Icosahedral):Spherical, amount of nucleic acid that can be packaged is limited by the of the particle • Virus structure is studied by: • Transmission electron microscopy (EM) • Cryo EM – one of the most powerful methods currently available • X-Ray diffraction
Principles of basic virus structure • Nucleoprotein must be stable but dissociatable • Capsid is held together by non-covalent, reversible bonds: hydrophobic, salt, hydrogen bonds • Capsid is a polymer of identical subunits • Terms: • Capsid = protein coat • Structural unit = protein subunit • Nucleocapsid = nucleic acid + protein • Virion = virus particle • Capsid proteins are compactly folded proteins which: • Fold only one way, and robustly • Vary in size, generally 50-350 aa residues • Have identifiable domains • Can be described topologically; similar topological features do not imply evolutionary relationships
Basic virus structure DNA or RNA Capsid protein Naked capsid virus Nucleocapsid + = Lipid membrane, glycoproteins Enveloped virus Nucleocapsid +
Capsid symmetry Matrix Lipid Glycoprotein Icosahedral Helical Naked capsid Enveloped
Icosahedral naked capsid viruses Adenovirus Electron micrograph Foot and mouth disease virus Crystallographic model
Helical naked capsid viruses RNA Protein Tobacco mosaic virus Electron micrograph Tobacco mosaic virus Model
Icosahedral enveloped viruses Herpes simplex virus Electron micrograph Herpes simplex virus Nucleocapsid cryoEM model
Helical enveloped viruses Influneza A virus Electron micrograph Paramyxovirus Electron micrograph
Properties of enveloped viruses Envelope is sensitive to Drying Heat Detergents Acid Consequences Must stay wet during transmission Transmission in large droplets and secretions Cannot survive in the gastrointestinal tract Do not need to kill cells in order to spread May require both a humoral and a cellular immune response
Properties of naked capsid viruses Capsid is resistant to Drying Heat Detergents Acids Proteases Consequences Can survive in the gastrointestinal tract Retain infectivity on drying Survive well on environmental surfaces Spread easily via fomites Must kill host cells for release of mature virus particles Humoral antibody response may be sufficient to neutralize infection
Atomic Resolution Microscope at UC Berkeley The Atomic Resolution Microscope is specifically designed for performance in the high resolution imaging mode with a point-to-point resolution of 1.5Å. Typical modern transmission EM: This JEOLTransmission Electron Microscope, similar to the one we use at Rutgers, is housed at Colorado State University
Classification of viruses • on the basis of: • nucleic acid they contain ( DNA or RNA ) • the size, shape and structure of the virus • the tissue the infect
DNA viruses • i) Poxivirus group (DNA) virus – pathogenic to skin small pox, cow pox • ii) Herpes virus group (DNA) • Latent infection may occur and lasts the life span of the host. • Cold sores • Shingles • Chicken pox • iii) Adenovirus group (DNA) • Catarrhs • Conjunctivitis • iv) Papovirus group (DNA) • Wart virus
Adenovirus-Associated Human Disease Pharyngitis Acute Respiratory Disease Pneumonia Pharyngoconjunctival Fever Epidemic Keratoconjuntivitis Genitourinary Infections (cervicitis, urethritis ) Gasteroenteritis Some asymptomatic and persistent infection Adenovirus oncogenically tranforms rodent cells but not human cells.
Human T- cell Lymphotropic Virus • HTLV-1 stands for Human T-cell Lymphotropic Virus. • It is a retrovirus, in the same class of virus as the AIDS virus, HIV-1. • HTLV-I is associated with a rare form of blood dsycrasia known as Adult T-cell Leukemia/lymphoma (ATLL) and a myelopathy, tropical spastic paresis. • However, even with infection, fewer than 4% of seropositive persons will experience overt associated disease.
Hepatitis • Hepatitis • a. chemically induced • b. viral infection A, B, C, D, E, F • Viral hepatitis is the most common liver disease found worldwide. • Epstein Barr virus • Herpes virus • Cytomegalovirus
Hepatitis B (HBV) • DNA virus • has an outer surface structure known as hepatitis B surface antigen (HBs Ag) & an inner core component known as hepatitis B core Antigen (HBc Ag) • Long incubation period—up to 6 months. • Transmitted through blood contact. • Some modes of transmission as those for HIV. • HBV is very serious illness. • Series of 3 immunizations are given on day 0, 30, 180.
Hepatitis C • Blood borne pathogen. • Also found in water like HV-A • Many become carriers
Hepatitis D • Super-infects some patients who are already infected with HBV. • HBV is required as a helper to initiate infection. • blood borne.
Picorna Virus Primary site of infection is lymphoid tissue associated with the oropharynx and gut (GALT).
Genital Warts - HPV • Causes genital warts
Chicken Pox Active lesions