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BIO1130 Lab 2 S cientific literature. Laboratory objectives. After completing this laboratory, you should be able to: Determine whether a publication can be considered an original scientific contribution. Carry out bibliographic research using on-line resources at the University of Ottawa
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Laboratory objectives After completing this laboratory, you should be able to: • Determine whether a publication can be considered an original scientific contribution. • Carry out bibliographic research using on-line resources at the University of Ottawa • Use Mendeleyto collect scientific literature articles, insert reference within a text and generate and formatted reference list.
Credible sources of scientificinformation: • Include a full description of the methodology used to obtain the presented results, and a description of how the conclusions were derived. • Are written by the researchers who actually did the reported research (i.e. are not ghost written) • Have been peer-reviewed, i.e. subject to review by independent scientific experts in the field.
Scientific research articles • Authors have done the research (or at least participated in it) • The methods are described in sufficient detail for the study to be reproduced and the results verified • Study results (data) are presented, at least in summary form. • The work has been reviewed (anonymously) by independent experts (“peer review”) who have recommended publication. • The work has been judged of sufficient interest and quality by independent reviewers and editors to merit publication • Scientific articles that have these elements are referred to as the primary scientific literature.
Searching the primary scientific literature: some problems • The volume of scientific information is enormous. • There is no single searchable index that covers all scientific journals and books.
Solutions available to students • Web of Science, Scopus, Medline….: Google-like tools for titles and abstracts of articles, as well as keywords • Organized into thematic databases covering different subject areas
Lab2 assignments Two exercises: • In-lab questionnaire about scientific literature and online databases. Answer this questionnaire DURING THE LAB (not at home) on the lab website (Lab2Lab2 Questionnaire). Worth 90% of Lab2 mark • Mendeley exercise: Start during the lab – can be finished at home(before midnight tomorrow). Worth: 10% of lab2 mark.
Scientific literature questionnaire • Access your personal set of questions (you’re not sharing with your lab partner) • Go to BIO1130 Lab website Lab2“lab2 questionnaire” • You can SAVE your answers then return to the questionnaire later (make sure you save your progress regularly in case of technical problem). • SUMBIT your answer with the submit button • WARNING: SUBMISSION IS FINAL
Scientific literature questionnaire • Questionnaire must be submitted during lab session • Save your answers progressively and write them down on paper. • Your score will be displayed immediately after you submitted your questionnaire: Contact your TA if you don’t see your score • Important: This is YOUR questionnaire: even if your TAs suggest an answer, it is your choice to select it and submit the questionnaire. No second thoughts.
Strategies for searching by key-words • Choose appropriate search terms (mostly a case of trial and error!) • The more search terms, or the more precise terms you use, the smaller the list of hits. • To get longer lists of hits, use fewer terms, more general terms, or « wildcards ». • Change terms (using synonyms) if you do not retrieve a satisfactory set of hits • You should try several different searches using different sets of keywords (do NOT rely on a single search!)
FAQs: • Do I have to complete the questionnaire before the lab? NO • Do I have to attend the lab? YES (it is mandatory and you must collect your corrected lab1) • Do my lab partner and I share the same questions? NO – you have your own set of questions. But you can help each other • Is there a report to hand in for lab2? NO but there’s the Mendeley exercise
Mendeley assignment • Short exercise to teach you how to insert citations in a text and format a reference list using a reference management software (Mendeley): • 1- Read the Mendeley module on the lab website (Lab2 Page) to learn how to use Mendeley. • 2- Visit the Mendeley exercise Page (link on Lab2 page) and follow instructions. • 3- Complete the exercise and send your formatted document to [DESIGNATED TA] by email at [TA ADDRESS HERE]: • Write full name, student ID and lab section in the email text and attached assignment file. • 4-Due date: finish during the lab if possible (you stay until you’re done or the lab session is finished). Otherwise send to TA within 2 days after your lab.
Version 2 of Mer Bleue report • Optional • Final grade is the average of both versions (or version 1 grade if no version 2 is handed in) • Attach version 1 to version 2 • Due date: • Week1 sections: 2 weeks after lab2 • Week1 sections: 1 week after lab2