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by NLM David Gillikin, Online Update Joyce Backus, MedlinePlus Maria Collins, DOCLINE

NSU HPD NLM Update based on presentations Originally Presented at the MLA Annual Meeting May 2007. by NLM David Gillikin, Online Update Joyce Backus, MedlinePlus Maria Collins, DOCLINE. Modified and updated by Todd J. Puccio August 24, 2007. PubMed / Medline Indexing. FY2006

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by NLM David Gillikin, Online Update Joyce Backus, MedlinePlus Maria Collins, DOCLINE

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  1. NSU HPD NLM Update based on presentations Originally Presented at the MLA Annual MeetingMay 2007 by NLM David Gillikin, Online Update Joyce Backus, MedlinePlus Maria Collins, DOCLINE Modified and updated by Todd J. PuccioAugust 24, 2007

  2. PubMed / Medline Indexing • FY2006 • 629,000 indexed citations added to MEDLINE. • Highest ever indexing rate (last year was 606,596 indexed citations). • 46,918 gene indexing links created (4% increase from last year). • FY2007 • 175,177 citations indexed in during the 2nd quarter, at a rate of over 700,000 articles per year. • More than 85% of MEDLINE citations now supplied electronically by publishers.

  3. Indexing • Electronic Journal Indexing • 120 online-only journals indexed for MEDLINE, an increase from 107 a year ago. • 276 additional journals - the online version is indexed instead of the print version.

  4. Bioethics Information Resources • Web resource developed to provide additional support to the subject of bioethics. • www.nlm.nih.gov/bsd/bioethics.html • Main links on: • PubMed Special Queries page. • List of NLM Databases and Resources on the NLM Home page.

  5. OLDMEDLINE • Mapping OLDMEDLINE Keywords to current MeSH: • 76% of citations mapped completely (over 1.34 million citations). • These completed records are now converted to the status [PubMed – Indexed for MEDLINE]. • Work continues on mapping the additional keywords. • Conversion of the citations from the 1949 Current List of Medical Literature (CLML) has begun.

  6. PubMed • PubMed – surpassed 17 million records • MEDLINE – over 15.8 million (93%) • In Process records – over 252,000 (1.5%) • OLDMEDLINE – over 420,000 (2.5%) • PubMed-only records – over 524,000 (3%)

  7. PubMed Enhancements • New version of the Entrez system being developed. • Beta version made available for review this spring. • New system to be coming online soon. • Foundation for the next generation of features and capabilities on Entrez databases, including PubMed.

  8. PubMed Enhancements • AbstractPlus view • New default view • Single citation display – customizable selection using My NCBI • Library icons • New system version displays a single library icon in upper right hand corner – different size (100 pixels x 25 pixels) • If users activate more than one icon, the icon displayed at the top will be selected according to the following priority: • Library LinkOut full text icon • Library LinkOut print icon • Outside Tool icon

  9. AbstractPlus

  10. PMC Scanning Project • Journal Back Issues loaded to PubMed. • 39 Completed Journals and growing. • 70,231 total citations added. • From journals such as PNAS, Plant Physiology, Journal of Physiology, Journal of Clinical Pathology, and Journal of Anatomy • Next step, adding abstracts found in PMC citations not found in PubMed Citations.

  11. PMC Scanning Project • From the 38 completed PMC back issue scanned titles: • 40,640 new abstracts added from 23 titles. • 15 titles did not have new abstracts to add. • Process now part of standard workflow for PMC scanned citations to be included in MEDLINE/PubMed.

  12. 3rd Party Back Issue Citations • Publisher requests to include their retrospective data. • Goal: • Load citations for journal issues not previously included in MEDLINE/PubMed. • New citations published from 1966 and up will be put into MEDLINE format. • These citations will not be indexed with MeSH. • Also, add abstracts from Publisher citations that are not found in MEDLINE citations. • Slow process, dependent upon QA testing and review.

  13. NCBI / Genetic Alliance Web Resource • New Web site feature on www.geneticalliance.org site. • Accessed through the “Disease InfoSearch” feature. • Designed to help patients, care givers, and health professionals easily locate & navigate information on genetic disorders.

  14. NCBI / Genetic Alliance Web Resource

  15. Training • NLM Theaterhttp://www.nlm.nih.gov/pubs/techbull/mj07/mj07_mla_theater_ppt.html • Over 14 NLM products and services are being discussed and demonstrated. • Experimenting with recording the theater presentations with Adobe Connect, and posting them on the NLM Web site along with the PowerPoint slides. • Working with NTCC to develop live online clinics on using NLM products and services • Beginning in August – brief session on searching for chemicals and drugs in PubMed

  16. DailyMed • http://dailymed.nlm.nih.gov/ • Provides high quality information about marketed drugs. • Includes FDA approved labels (package inserts). • 2,629 approved prescription drugs included in the database.

  17. Specialized Information Services (SIS) • TOXLINE Unified - Search results from TOXLINE Core & TOXLINE Special merged. Subset of Medline • TOXNET http://toxnet.nlm.nih.gov/ including Household ProductDatabase • TOX MAP: • Enhanced, more accurate map presentations. • Improved location data using enhanced data from EPA. • Includes 2005 Toxics Release Inventory (TRI) data. • ToxMysterylaunched – interactive learning site for 7–10 year olds. • ToxTown – Toxicology learning resource for children • WISER 2.3 Hazardous material resource for First Responders. • ToxSeekhttp://toxseek.nlm.nih.gov/updated with an enhanced meta-search engine and clustering tool.

  18. Specialized Information Services (SIS) • Genetics Home Reference http://ghr.nlm.nih.gov/ • OMIM (Online Mendelian Inheritance in Man) http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=OMIM • ChemIDPlus http://chem2.sis.nlm.nih.gov/chemidplus/chemidlite.jsp • List of NLMDatabases and Resources

  19. MedlinePlus Update • Where in the world is MedlinePlus? • What’s new? – health topic pages • NIHSeniorHealth - new topics and videos • What’s coming? – RSS and search

  20. Health topics: 740 English (19,000 links) 704 Spanish (5,500 links) Interactive tutorials: 175 Drug database and herbals & supplements database: approx 1000 monographs Links to ClinicalTrials.gov 776 NIHSeniorhealth: 31 topics Encyclopedia: approx 3700 articles; 2300 images Surgeries: 148 videos One weekly podcast Health news: Approx 15-20 stories per day Dictionary Magazine:4 issues GoLocal: 21 sites Directories: Over 100 directories of doctors, hospitals, clinics and libraries. Email lists: 11 daily & weekly MedlinePlus Today

  21. MedlinePlusen español Health topics: 740 English (19,000 links) 704 Spanish (5,500 links) Drug database and herbals & supplements database: approx 1000 monographs Health news: Approx 15-20 stories per day Encyclopedia: approx 3700 articles; 2300 images Surgeries Email lists: daily & weekly Interactive tutorials: 175

  22. Health Topics Homepage – 1998

  23. Health topics page - 1999

  24. Health topics page - 2001

  25. Health topic page – 2000

  26. Health topic page - 2001

  27. Long list of links with lots of scrolling • Another click to get to “real” information • Lots of words and links but no pictures and little white space

  28. NIHSeniorHealth Update • Flash Video • New topics • New home page

  29. New banner Status bar indicates total length of video and current progress Slider for fast forwarding and rewinding Volume slider Closes the video window Play starts and pauses the video Transcript opens the captioning text in a separate window Restarts video from the beginning

  30. Five new topics (32 total): New Topics (Since May 2006) • Heart Attack (NHLBI) • Paget's Disease of Bone (NIAMS) • High Blood Pressure (NHLBI) • Falls and Older Adults (NIA) • Depression (NIMH) • Skin Cancer (NCI)

  31. NIHSeniorHealth Homepage or

  32. RSS feeds & PodCasts • NIH Radio http://www.nih.gov/news/radio/index.htm • NIH PodCasts http://www.nih.gov/news/radio/nihpodcast.htm

  33. RSS feeds & PodCasts • NLM RSS & Podcastshttp://www.nlm.nih.gov/listserv/rss_podcasts.html • MedlinePlus: NLM Director's Comments podcast

  34. RSS feeds & PodCasts

  35. NLM Databases • NLM Databases & Electronic Resources : Complete List http://www.nlm.nih.gov/databases/ • NLM Gateway Combined Federated Search of the NLM Databases http://gateway.nlm.nih.gov/gw/Cmd

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