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Scripts to combine UNC Shape Analysis with Spherical Wavelet Features

Scripts to combine UNC Shape Analysis with Spherical Wavelet Features. Plan/Expected Challenges/Publication. Team. Yi Gao, GT (algorithms) Delphine Nain, GT (algorithms) Martin Styner, UNC (algorithms). Software: tcsh scripts

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Scripts to combine UNC Shape Analysis with Spherical Wavelet Features

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  1. Scripts to combine UNC Shape Analysis with Spherical Wavelet Features Plan/Expected Challenges/Publication Team Yi Gao, GT (algorithms) Delphine Nain, GT (algorithms) Martin Styner, UNC (algorithms) • Software: tcsh scripts • PIPELINE 1: (after UNC preprocessing, before UNC statistical scripts) • INPUT: Read UNC preprocessed META surfaces • Re-interpolate the spherical meshes to use a recursive icosahedron structure. The output are remeshed META surfaces. • Run the itkSWavelet filter on re-interpolated meshes to obtain spherical wavelet coefficients • OUTPUT: Write spherical wavelet coefficients (SWC) to a text file that will be read by the UNC statistics scripts • PIPELINE 2: (after UNC stats scripts) • INPUT: raw and corrected p-values for the SWC features • Write visualization scripts to visualize the SWC p-value map on the mean shape • OUTPUT: Colormap that can be visualized KWVisu To be Accomplished by end of Programming Week -Write and test scripts on the female caudate structure -Submit code to NA-MIC repository -Write ITK Insight journal

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