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Plans to handle all the information generated on GEM

Comprehensive management plan for GEM Germplasm data including agronomic, character, lab, and image data. Interactive services for data utilization & requests.

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Plans to handle all the information generated on GEM

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  1. Plans to handle all the information generated on GEM Germplasm Enhancement of Maize M. Blanco & M. Shen USDA-ARS NCRPIS GEM - August 17, 2006 -

  2. GEM Information • Agronomic data • Agronomic character data • Lab data • Images for the GEM recommended lines • Information utilization and interactions Germplasm Enhancement of Maize

  3. GEM Information – Agronomic Data • Agronomic data • All nursery, topcross, & yield trial records in PRISM • All shipping records in PRISM for real-time inventory updates • Agronomic character data • Lab data • Images for the GEM recommended lines • Information utilization and interactions Germplasm Enhancement of Maize

  4. Agronomic Data – A YT worksheet, a field map, and a field book Germplasm Enhancement of Maize

  5. GEM Information – Character Data • Agronomic data • Agronomic character data • Data of disease, insect, traits, etc. from SCA and private companies • Query (PRISM): researcher, specific disease, insect, etc. • Limitation: no stat analysis • Accomplishment: 05 character data in PRISM • Lab data • Images for the GEM recommended lines • Information utilization and interactions Germplasm Enhancement of Maize

  6. GEM Information – Character Data Germplasm Enhancement of Maize

  7. GEM Information – Lab Data • Agronomic data • Agronomic character data • Lab data • Responsibility: Sue Duvick – data generating, Andy Smelser – data migration, & Mack Shen – analytical and tech support • Capability (PRISM): DSC data, NIR data, GC data, etc. • Milestone (data migration): On-going processMission accomplished: all NIR for BC’s, year 02, 03, 04 NIR, & DSC data, 05 NIR data (partial) • Credit: After training, Andy did migration during his pollination time • Images for the GEM recommended lines • Information utilization and interactions Germplasm Enhancement of Maize

  8. Lab Data – Databook in PRISM Germplasm Enhancement of Maize

  9. GEM Information – Image Data • Agronomic data • Agronomic character data • Lab data • Images for the GEM recommended lines • Images on the GEM web site for free download • Images in PRISM • Information utilization and interactions Germplasm Enhancement of Maize

  10. GEM Information – Image Data • The format is based on NCRPIS procedures for capture of corn ear traits • There are usually 3 images for each line: ear image, ear cross section image, and kernel image Germplasm Enhancement of Maize

  11. GEM Information – Image Data UR11003:S0302-937-001-B-B-Sib Germplasm Enhancement of Maize

  12. GEM Information – Image Data Germplasm Enhancement of Maize UR11003:S0302-937-001-B-B-Sib

  13. GEM Information Management • Agronomic data • Agronomic character data • Lab data • Images for the GEM recommended lines • Information utilization and interactions • Provide new information on GEM website • Need certain data? Send me a request • How to utilize the data more efficiently? • Help! Need input for the improvements Germplasm Enhancement of Maize

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