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Exploring Molecule World

Molecule World is a powerful tool that allows you to search and display molecular structures from various databases such as PubChem, NCBI, and PDB. With its user-friendly interface, you can easily visualize atoms and identify elements. Molecule World also provides structures related to classroom topics, including DNA, proteins, enzymes, and more. Coming in July: Rainbow Coloring and Sequence Displays!

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Exploring Molecule World

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  1. Exploring Molecule World www.Digital-World-Biology.com

  2. Molecule World allows you to search and display structures from multiple databases • PubChem • NCBI – Cn3D • PDB Atoms are shown with the appropriate size. A color key lets you identify the elements. www.Digital-World-Biology.com

  3. Molecule World comes with some structures related to classroom topics 1BNA = double stranded DNA 1OCC= cytochrome C oxidase, used in DNA barcoding 1TAU = Taq polymerase & DNA, used in PCR 1TRZ = human insulin 2BAM = BamHI, a restriction enzyme, cuts DNA 2DN2 = Human hemoglobin 3ADF = Green fluorescent protein (GFP) 3ZTN = part of an antibody bound to hemagglutinin from influenza 4BBS = RNA polymerase bound to DNA 4TRA = yeast tRNA Bromocresol purple, Bromophenol blue, caffeine, glucose, penicillin, phenol red www.Digital-World-Biology.com

  4. Examples of Molecule World structures shown in different rendering & coloring modes www.Digital-World-Biology.com

  5. Cytochrome C oxidase The grey (neutral) area shows the membrane-spanning region of cytochrome C oxidase www.Digital-World-Biology.com

  6. Taq polymerase The red & white chains are DNA. www.Digital-World-Biology.com

  7. BamHI endonuclease The red and white chains are DNA.

  8. This is hemoglobin. Each ring is a heme. Human hemoglobin www.Digital-World-Biology.com

  9. Green Fluorescent Protein The white residue is the GFP chromophore. www.Digital-World-Biology.com

  10. Antibody bound to an inluenza antigen The blue and green chains are from the antibody.

  11. Coming in July! Rainbow Coloring & Sequence Displays www.Digital-World-Biology.com

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