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Task 1.2 Core Databasing

This progress report outlines the goals, architecture, data domain modeling, and roadmap for the Oceanomics Partners project. Emphasizing provenance and future plans for data integration. Contact us at databasing@oceanomics.fr for more information.

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Task 1.2 Core Databasing

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  1. Task 1.2CoreDatabasing Progress Report May 2014 - Roscoff

  2. TASK 1.2 : CoreDatabasing • Outline • Refresher on goals and architecture • Data domainmodelling • Roadmap • Closingword

  3. CoreDatabasing : a refresher

  4. Architecture Summary Titre TARA YELLOW PAGES ORGANIZATION OceanomicsPartners

  5. TYPO – DB : modellingfoundations Titre Environment Sampling Morpho – Imaging CTD SampleBarcodes WP3 Sampling Events Nutrients Underway TSG CAST Net Pump Omics WP4 Satellite WP2 Provider Modelling Operation WP5 Update Delete Create Provenance

  6. TYPO – DB : emphasizing provenance Titre RETRIEVE UPDATE INSERT First step Second step

  7. Short Term Plan : Web of Tara Files Deploy FTP server at Roscoff in replacement of ftp://oceans.ebml.de ? ? Ideally : beforemid-july

  8. Short Term Plan : Web of Tara Files

  9. Medium Term Plan : Move forward to TYPO

  10. Data IntegrationRoadmap Web of Tara Files …

  11. T1.2 Team Members Titre Léa Joret Christophe Caron Mark Hoebeke Julien Wollbrett Nov. 2013 : 3 years May 2014 : 2 years Contact : databasing@oceanomics.fr Don’tforget the Data COLLECTIONSession

  12. A Final Word on EcoTaxa Goal : E-collaborative taxonomicassignment (of objects on images) Information Objet selectionné Historique annotation Noeudtaxoassocié Data object (station ,source, profondeur, ech…) Arborescence de Classification Liste objet image Triage par taille, rang, annotated/not annotated…. Page 1 2 3 4 5 (10, 20, 50, all par page) • Modes de selection des objets: • All Inside Selected node • All outside the selected node • All/ Viewed / not viewed • All/ Validated / doubts / errors

  13. A final Word on EcoTaxa : Status Sébastien Collin Marc Picheral Lars Stemmann Jean-Olivier Irisson Christophe Caron Mark Hoebeke Léa Joret Julien Wollbrett

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