Publishing and Presenting Clinical Research 2013 Week Two

1. Publishing and Presenting Clinical Research 2013Week Two Amy J. Markowitz, JDamyjmarkowitz@alum.wellesley.edu415-307-0391

2. Today's agenda • Questions about last week? • Abstracts • The basics • Trimming • Getting them accepted

3. Predictions about your Introductions • Much longer than needed • “Multidirectional” • Intimidating, rather than welcoming • “Fancy” phrases • Dense • Anumeric • “Vague” phrases

4. And, in few words, I dare say that of all the studies of men, nothing may be sooner obtained than this vicious abundance of phrase, this trick of metaphors, this volubility of tongue, which makes so great a noise in the world. They [The Royal Society] have therefore been most rigorous in putting in execution the only remedy that can be found for this extravagance: and that has been a constant resolution to reject all the amplifications, digressions, and swellings of style, to return back to the primitive purity and shortness, when men delivered so many things almost in an equal number of words. The Royal Society of London for Improving Natural Knowledge Thomas Sprat (1 6 3 5 – 1 7 1 3)

5. Abstracts • Remember what we said last week: (A > B) Title = dynamic and conclusive, rather than descriptive “Hypoxia Inhibits Kv1.5 Channels in Rat Pulmonary Artery Smooth Muscle Cells” is preferable to “Effects of Hypoxia on Kv1.5 Channels.

6. The 4 parts of an abstract (A > B) • Introduction: Why would it matter? Hypothesis? • Methods: How (and how compared?) • Results: Show it. More (much more) important to feature one GOOD result than 20 mediocre findings. • Discussion: What it means.

7. Warning: My pet peeves • Density • Too many numbers (e.g., P values, XS precision) • Too many words • Balance words and numbers • Abbreviations • Abstruse language or methods • Vacuous or repetitive conclusions (report immediately to the Dept. of Redundancy Dept.)

8. New JAMA Abstract Format

9. Background/Intro: Concise • Aim for < 20% of your available space • Include the Research Question • Could someone not familiar with the field say… • Why you did the study • How it advances current knowledge

10. Methods: 30% of Real Estate • Design – Study Type • Subjects – Clear I.D. of Cohort • Measurements – Description, not list • Analysis – Consider a Table, include Limitations • Implications – Key to pique interest

11. Methods: Clear and Precise • Who (what) did you study? Inclusion/Exclusion Criteria • What, if anything, did you do to them? • How did you make your measurements?

12. Review: Organization of Measurements • Predictors before outcomes • Medical presentation • History, physical, simple lab, complex stuff • Explain odd decisions, missing data, etc. • “Appropriate” level of detail

13. Analysis (40%) • Lead with the main finding – orients the rest of the abstract • Avoid a surfeit of numbers – explain in “lay-stats” lingo • How did you estimate the effect size? • How did you determine the precision and significance of the effect size? • Univariate • Multivariate (explain what you adjusted for) • Add Limitations section, if important for context

14. Trimming abstracts • NBD – Review the draft paper and cherry pick your key lines • The words you have written DO NOT having feelings - really.

15. Getting abstracts accepted • Follow the rules (the corollary to getting 200 points for putting your name on the top of the SATs) • Don’t provide reasons to reject • Correlation (P[acceptance], reg. fee) > 0.8 • 1-minute principle

16. Time for Your Stuff Can you ID the study question? Can you ID the study design? Can you ID the critical finding? Are limitations clear? Can you discern the implications?