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Fig. S1. 1 17 2 20 2 13 1 9 5 1 1 1 1 1 1 1 1 1 17 1 1 11 1 7 1 22 3. Qin et al. 2010 scaffold72363 2 MH0006. 58. 55. Ruminococcus sp. SR1/5 (CBL20088). 72. Ruminococcus obeum A2-162 (CBL23218). 48. Qin et al. 2010 scaffold1333 11 O2.UC18. 59.

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1 17 2 20 2 13 1 9 5 1 1 1 1 1 1 1 1 1 17 1 1 11 1 7 1 22 3

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  1. Fig. S1 1 17 2 20 2 13 1 9 5 1 1 1 1 1 1 1 1 1 17 1 1 11 1 7 1 22 3 Qin et al. 2010 scaffold72363 2 MH0006 58 55 Ruminococcus sp. SR1/5 (CBL20088) 72 Ruminococcus obeum A2-162 (CBL23218) 48 Qin et al. 2010 scaffold1333 11 O2.UC18 59 Ruminococcus sp. 5 1 39B FAA (ZP 04856815) 56 clones 45 Ruminococcus obeum ATCC 29174 (ZP 01962380) Qin et al. 2010 scaffold33395 3 MH0080 23 clones Qin et al. 2010 C3588046 1 MH0039 Ruminococcus torques L2-14 (CBL25606) 80 Ruminococcus gnavus ATCC 29149 (ZP 02040259) 52 Clostridium sp. D5 (ZP 08130303) 91 Lachnospiraceae bacterium 1 4 56FAA (ZP 08616477) 1 Lachnospiraceae bacterium 3 1 57FAA CT1 (ZP 08607031) Qin et al. 2010 scaffold4249 17 O2.UC18 27 Qin et al. 2010 C8072424 1 MH0006 1 66 Qin et al. 2010 C2085299 1 MH0051 39 0 Fecal clone 1 clone Qin et al. 2010 scaffold35537 2 V1.UC13 48 2 Qin et al. 2010 scaffold14372 1 MH0082 Clostridium phytofermentans ISDg (YP 001558296) Qin et al. 2010 scaffold64501 1 MH0064 9 Shuttleworthia satelles DSM 14600 (ZP 04454655) 38 37 C3616219 1 V1.CD4 8 77 Qin et al. 2010 scaffold43837 4 MH0050 Roseburia inulinivorans DSM 16841 (ZP 03753293) 17 Qin et al. 2010 scaffold103834 1 MH0065 1 Fecal clone 1 clone 3 Qin et al. 2010 scaffold101031 3 MH0053 38 Qin et al. 2010 scaffold14412 4 MH0054 Qin et al. 2010 scaffold33708 3 O2.UC1 Qin et al. 2010 scaffold41660 1 MH0045 100 ThermoanaerobacteriumsaccharolyticumJW/SLYS485 (YP 006390853) 99 ThermoanaerobacteriumxylanolyticumLX11 (YP 004471776) Clostridium celatumDSM 1785 (ZP 19296596) 100 Qin et al. 2010 scaffold148001 2 MH0012 88 AkkermansiamuciniphilaATCC BAA-835 (YP 001878706) 93 Clostridium methylpentosumDSM 5476 (ZP 03705304) Qin et al. 2010 scaffold3482 3 MH0066 98 89 82 Fig. S1: Phylogenetic tree of deduced protein sequence of propanol dehydrogenase pduQ. Database matches to R. inulinivorans (ABC25529) of at least 70% as well as the top hits below this cut-off (Thermoanaeraobacterium saccharolyticum YP_006390853,55%; T. xylanolyticum YP_004471776, 56%; C. celatum ZP_19296596, 58%; C. methylpentosum ZP_03705304, 51%; Akkermansia muciniphila YP_001878706, 58% are shown. Number of hits within the metagenomic dataset of Qin et al (2010) with at least 55% identity are indicated to the right (sequences with at least 95% identity were grouped; for a list of all hits see Supplementary Table S7). Sequences from clone library analysis of a human faecal sample (≥95% identity grouped) are shaded. Grey tree branches indicate gene with lower identity to R. inulinivorans assumed not to be bona-fide pdQ genes. 0.1

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