1 / 4

MGI Updates

MGI Updates. Joel Richardson. MGI 5.0. M otivation: Get off Sybase Modernize infrastructure Features: Frontend db no longer a clone of backend db Translation step (the Mover) Engines: Postgres , Lucene / Solr (performance!) Server: Jboss , SpringMVC

tasha
Download Presentation

MGI Updates

An Image/Link below is provided (as is) to download presentation Download Policy: Content on the Website is provided to you AS IS for your information and personal use and may not be sold / licensed / shared on other websites without getting consent from its author. Content is provided to you AS IS for your information and personal use only. Download presentation by click this link. While downloading, if for some reason you are not able to download a presentation, the publisher may have deleted the file from their server. During download, if you can't get a presentation, the file might be deleted by the publisher.

E N D

Presentation Transcript

  1. MGI Updates Joel Richardson GMOD Meeting

  2. MGI 5.0 • Motivation: • Get off Sybase • Modernize infrastructure • Features: • Frontend db no longer a clone of backend db • Translation step (the Mover) • Engines: Postgres, Lucene/Solr (performance!) • Server: Jboss, SpringMVC • Client: AJAX, YUI. Pagable/exportable results. Web services. • Backend (master) remains on Sybase for now • When: • Next week GMOD Meeting

  3. IMSR 3.0 • See previous slide • Completely off Sybase (frontend and backend) • Frontend completely Lucene/Solr driven. (Blazingly fast) • New look GMOD Meeting

  4. MouseMine • Part of the InterMOD consortium • Initial version will contain a subset of MGI, plus a little more: • Features (mouse&human); Coordinates; Orthologies; Synteny blocks; Alleles; Strains and Genotypes; Annotations (GO, MP, Disease); Pubs; Cross refs; • Updated weekly (in sync with MGI) • Status: • Hired a developer • Completed several rounds of prototyping • Currently setting up servers in local cloud • Anticipate first public release: Q3 this year GMOD Meeting

More Related