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Nobel price 2006. "for their discovery of RNA interference - gene silencing by double-stranded RNA". Andrew Z. Fire. Craig C. Mello. Serendipity?.
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Nobel price 2006 "for their discovery of RNA interference - gene silencing by double-stranded RNA" Andrew Z. Fire Craig C. Mello
Serendipity? Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegansAndrew Fire, SiQun Xu, Mary K. Montgomery,Steven A. Kostas, Samuel E. Driver & Craig C. Mello NATURE | VOL 391 | 19 FEBRUARY 1998 They worked on something else in C. elegans Gene expression – sense RNA (control) Gene silencing – antisense RNA (weak effect) One more controla with double strand (s-as) RNA, SURPRISE – IT WORKED VERY WELL
Nobelova price experiment dsRNA blocks target mRNA asRNS dsRNS
Not absolute new Drosophila (Elbashir, EMBO J, 2001, Genes and Dev, 2001) dsRNA → 21-23 nt small dsRNA small interferring RNA – siRNA siRNS 21-25 nt dsRNA from a bigger dsRNA precursor molecule
These are coded in genome – also in ours C. elegans (Lee, 1993, Cell) NON CODING SEQUENCES! SMALL (61 → 22nt) RNA lin-14 mRNS 3’ UTR komplementerita REGULATION OF GENE EXPRESSION microRNA (miRNA)
miRNS biogenesis The code is transcribed by RNA polymerase II More possibilities – separated - 1 miRNA – clusters – in INTRONS! Mendell, 2008, Cell
Biogenesis and effect of siRNA Dykxhoorn, 2003, Nat Rev Mol Cell Biol
Finalisation of siRNA • With proteincomplexes (coded in genome) • Dicer makes siRNA (+ATP) • RISC – komplex with siRNA, cuts mRNA(+ATP) • Argonauta – blocks translation
siRNA effect Eckstein, 2005, TIBS
Another possibility Inhibícia translácie
miRNA - functions In human genome at least 500 – 1000 miRNa genes 1-1,5 % of all structural genes A new (?) form of gene expression regulation – on the interface of transcription and translation THE LAST CHECKPOINT (SMALL NINJA POLICIMEN) miRNA expression regulation???? tissue specificity, dependent on ontogenesis Involved in Development, differentiation, apoptosis, cell cycle
miRNA functions One miRNA can regulate more mRNA (Lim, 2005, Nature) In different conditions different picture of expression miR-1 – heart, miR-124 – brain In vitro experiments miR-1 96, miR124 downregulated 174 génov
miRNA and disease miRNA profiles different in normal and malignant cells miRNA profiles in diabetes, cardiovascular and kidney diseases, degenerative disease of CNS – intensive research currently without aplication in practical medicine SNPs in miRNA genes and disease??? Therapeutical perspectives? Malignancies Farmakogenetics Design of artifical siRNA? Not a simple task Get them to the proper place – nanobiotechnology