Crop diversity

1. Crop diversity

2. Crop diversity • Most crop species have lower genetic diversity than their wild progenitors due to the ‘domestication bottleneck’ • However, crop species commonly harbor many distinct varieties and landraces that arose as a result of artificial, diversifying selection.

3. Major uses of crop diversity • Interspecific diversity (crop wild relatives) as well as intra-specific diversity are an important source for new alleles (such as disease resistance) in crop improvement efforts. • Different landraces and varieties are often well adapted to their local/regional agro-ecological niche and are unique in many phenotypic traits, such as stress response/resistance. • Agro-biodiversity is thought to have the potential to play a major role in climate-change adaptations of agro-ecosystems • Indigenous people who cultivate much of the world’s traditional crop diversity have often unique knowledge about uses of such diversity unknown to western society

4. Major threats to crop diversity • Agricultural intensification and crop monocultures can lead to genetic erosion (loss of genetic diversity) in crops • Crop replacement as dictated by the global marketplace or as development strategy can lead to the loss of entire crop species • Transgene escape from GMOs to crop wild relatives and traditional landraces (has probably already happened in maize in Mexico)

5. Trends in diversity of crops from wild ancestorsto modern cultivars Van der Wouw et al., 2009

6. Uptake of modern varieties Van der Wouw et al., 2009

7. Changes in spreads of crops worldwide Khoury et al., in prep

8. Decrease in heterogeneity between national diets 1967 - 2007 Khoury et al., in prep

9. Change in crop spread and abundance in national diets, 1967-2007 Khoury et al., in prep

10. Change in number of countries in which maize, rice and wheat are being eaten Khoury et al., in prep

11. Interspecific crop Diversity in the Compositae Interspecific crop diversity in the Compositae

12. Crop diversity in the Compositae • Ornamental • Gerbera x hybrida • Zinnia sp. • Seed oil • Helianthus annuus • Guizotiaabyssinica • Phytochemicals • Partheniumargentatum • Artemisia sp. • Edible leaves • Lactuca sativa • Cichoriumendivia • Tubers and roots • Helianthus tuberosus • Smallanthussonchifolius Dempewolf et al. 2008

13. Domestication is a process • The distinction ‘domesticated’ or ‘not domesticated’ is an over-simplification • Some crops have moved along this process further than others… Why? • In order to be able to look at domestication at a broad scale (e.g. family wide), we need to be able to understand how this crop diversity is partitioned. • We can recognize different levels of domestication • How can we decide which level?

14. Domestication index for Compositae crops

15. Level of domestication for major Compositae crops • Strongly domesticated: • sunflower (Helianthus annuus) • lettuce (Lactucasativa) • safflower (Carthamustinctorius) • endive (Cichoriumendivia) • chicory (Cichoriumintybus) • Semi-domesticated: • cardoon (Cynaracardunculusvar. altilis) • globe artichoke (Cynaracardunculusvar.scolymus) • noug (Guizotiaabyssinica) • Jerusalem artichoke (Helianthus tuberosus) • Yacon (Smallanthussonchifolius) • Weakly/not domesticated: • Stevia (Stevia rebaudiana)

16. Taxonomic diversity and number of strongly domesticated crops 20 - 18 - 16 - 14 - 12 - 10 - 8 - 6 - 4 - 2 - 0 - Fabaceae Poaceae Number of strongly domesticated crops Rosaceae Compositae Solanaceae Euphorbiaceae Rubiaceae Lamiaceae Melastomataceae Orchidaceae 5000 0 20000 10000 15000 25000 Number of species Dempewolf et al. 2008 Dempewolf et al. 2008

17. Why are there so few strongly domesticated crops in the Compositae? • Secondary compounds: • sequiterpene lactones, alkaloids and terpenoids • affect the palatability of a species or act as allergens • Nutritional considerations: • produce inulin rather than starch as storage carbohydrate; inulin is indigestible by the human gut • oils from Compositae species are high in unsaturated fatty acids, which carries health benefits but also makes the oil go rancid faster

18. Why are there so few strongly domesticated crops in the Compositae? • Adaptive traits: • wind dispersal or dispersal by adhesion to animal fur is common; might limit seed and fruit size • Mating systems: • self-incompatible outcrossers; might reduce the probability of domestication • Preferences of early farmers: • defenses against herbivory (e.g. secondary compounds or spines/thorns) • early farmers probably focused on crops that could supply them with reliable sources of carbohydrates or proteins

19. Neglected and underutilized species

20. What are neglected and underutilized species? • At present, only 150 plant species are used and commercialised on a significant global scale • Over 50% of the world's requirement for protein and calories are met by only three: rice, wheat and maize. • There are an estimated 7,000 species that play a crucial role in poor people's livelihood strategies and may have a significant potential for commercialisation. • Alongside their commercial potential, many of the underutilised plant species also provide important environmental services, as they are adapted to marginal soil and climate conditions.

21. Underutilized Species have the potential to contribute to livelihood improvement by: • increasing incomes • ensuring food security • improving nutrition • enhancing biodiversity • withstanding stress conditions • occupying important ecological niches • being produced with low external inputs • stabilizing ecosystems • creating new markets

22. Conserving Crop Genetic Diversity in – situ conservation vs. ex – situ conservation

23. An example of ex situ conservation - The ‘Doomsday’ vault 60 minutes piece on the Svalbard Global Seed Vault: http://www.cbsnews.com/video/watch/?id=3960837n