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More Siderophore Stuff

More Siderophore Stuff. Steven “Babyface” Backues Donnie “Big D” Berkholz Brooks “Mad Dog” Maki. Overview of Iron Uptake. Two basic strategies: - Reduction before uptake - Reduction after uptake. Reduction Before Uptake.

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More Siderophore Stuff

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  1. More Siderophore Stuff Steven “Babyface” Backues Donnie “Big D” Berkholz Brooks “Mad Dog” Maki

  2. Overview of Iron Uptake Two basic strategies: - Reduction before uptake - Reduction after uptake

  3. Reduction Before Uptake • Release of “reductants” into environment, or reducing enzyme bound to cell surface • Advantages: • No need for permeases, which can be used by pathogens such as phages • Disadvantages • Less specific, and can lead to toxicity from other metals (Cu(II), Cd(II), Co(II), Ni(II)

  4. Reduction After Uptake • Uses siderophores to bind Fe(III), which is released inside the cell, usually via reduction of iron from Fe(III) to Fe(II) • Highly specific, but requires more energy to form the siderophores and uptake system

  5. Is Reduction Difficult? For various fungal siderophores, reduction potential of Fe(III) is around –400mV The reduction potential of NAD+/NADH or NADP+/NADPH is around –320mV - So, there is a positive DG°’ but not any more positive than in many other NADH or NADPH driven reactions - Below pH of 7.9, decreasing pH favors reduction

  6. Other Release Mechanisms? • Degradation of the siderophore? • Release without reduction? • For Fe(III) only partially coordinated by a siderophore, Cl- ions can increase dissociation rates 100-1000 fold.

  7. Use and Storage of Iron • After reduction, Fe(II) is always bound to carrier proteins until used • Iron is always stored as Fe(III)

  8. Ferritin Ferritin is found in most animals, plants, and some bacteria. It can store up to 5,000 atoms of Fe(III) as [FeO(OH)]8[FeO(H2PO4)].

  9. Siderophores as Iron Storage • Mössbauer spectroscopy shows that reduction is not rate-limiting for siderophore uptake. • Experiments with 55Fe and a fluorescent ferrichrome analogue showed that while loaded siderophores were taken up within minutes, the iron was not fully released for up to 16 hours after uptake.

  10. In some fungi, one type of siderophore is used for uptake and another for storage - in N. crassa, coprogen shuttles, while ferricrocin stores - in R. minuta, Rhodotorulic acid used only for storage, not for uptake

  11. Amphiphilic Siderophores • Prior to binding, these siderophores are micelles with hydrophobic centers • With the addition of Fe(III) they form vesicles. • Vesicles are approx. 100 nm across with hydrophobic ring lined with hydrophilic heads • This structure is important in photoreactivity

  12. Photoreactivity • Light mediated decarboxylation of an alpha-hydroxy acid complexed to a transition metal ion is well known. • It has been found that this reaction also occurs in Fe-siderophore complexes. • Fe(III) petrobactin was readily photolyzed in this way under ocean surface conditions.

  13. Photoreactivity, the sequel • Photolysis is mediated by light in the ultraviolet spectrum • Therefore these reactions occur deep into the euphotic zone (80 m) • Fe-siderophore complexes are structurally stable in sterile sea water.

  14. Photoreactivity, the final chapter Two main products of photochemical reaction: hydrophobic (fatty acid tail) hydrophilic (head group - peptide) Fe (III) is reduced to Fe(II)

  15. Fe Cycling • What happens to Fe(II)? • Direct biological uptake • Oxidation back to Fe (III) (possibly complexed by another siderophore) • Possible chelation by organic ligands? • The photo-oxidized ligand continues to bind Fe(III) • Iron bound by these ligands may be more available for uptake, as stability is reduced from original siderophoreReferences

  16. Iron Scavenging by Pathogens • Within animals, all of the iron is generally complexed and being used, so bacteria must steal it, often by use of siderophores.

  17. Exochelins • Exochelins are released by M. tuberculosis. • They scavenge metal primarily from transferrin and lactoferrin, human iron binding proteins; less effectively from ferritin • They transfer their iron to mycobactins in the M. tuberculosis cell wall

  18. Heme Acquisition System A • This is a protein, not a siderophore • It or similar proteins are produced from many gram negative bacteria • It binds an entire heme molecule, extracting it from hemoglobin, then releasing it to the bacterial membrane receptor HasR.

  19. “The heme binding site is made up of some hydrophobic residues and is held by the two ligands: residue His32 lies on one side while Tyr75 completes the coordination of the heme iron.”

  20. More references • Photochemical cycling of iron in the surface ocean mediated by microbial iron(iii) binding ligands. K. Barbeau, E.L. Rue, K.W. Bruland, A. Butler. Letters to Nature 27 Sep. 2001 • Scientists Chart Iron Cycle in Ocean. National Science Foundation 27 Sep. 2001 • Sunlight Affects Iron Cycles. Pamela Zurer Biogeochemisty 1 Oct. 2001 • Marine Bacteria Foster Iron Cycling. Jacquelyn Savani University of California, Santa Barbara • Petrobactin, a Photoreactive Siderophore K. Barbeau, G. Zhang, D. Live, A. Butler American Chemical Society 7 Aug. 2001

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