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Domain Bakteria. Dunia bakteria: 23 Phylum. Bakteria: koloni. Sel Bakteri: morfologi. Sela Bakteria : morfologi. Salmonella sp. Borellia sp. Bacillus antharcis. Sianobakteria. Bakteri: Actinomycetes. Sel bakteri: Actinomycetes. Streptomyces indonesiensis. Sel Bakteria: Tanpa organela.
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Domain Bakteria • Dunia bakteria: 23 Phylum
Sela Bakteria : morfologi Salmonella sp. Borellia sp. Bacillus antharcis Sianobakteria
Sel bakteri: Actinomycetes Streptomyces indonesiensis
Sel Bakteria: Tanpa organela Struktur sel bakteri
Struktur sel bakteria • Tidak ada organela • Kromosom tunggal (DNA sirkular) dalam sitoplasma
Euryarchaeota Haloverax Methanospirillum Methanobacterium Crenarchaeota Thermoplasma Sulfolobus Methanothermus Desulfurococcus Thermoproteus Thermofilum Archaeoglobus Pyrodictium Methanococcus vannielii pSL 50 Methanococcus jannaschii pJP 96 pSL 12 Thermococcus 85/74 Methanopyrus pSL4 Marine SBAR5 BACTERIA pSL17 pSL22 pJP 27 pJP 78 Kararchaeota EUKARYOTES Filogeni Archaea
BACTERIA Deinococci Proteobacteria Gram positive Green Nonsulfur Bacteria Cyanobacteria Chlamydiae Thermotogales Planctomyces Aquificoles Bacteroides and relatives Green Sulfur Bacteria Spirochetes ARCHAEA And EUKARYA 0.1 changes per nucleotide (nt) Filogeni bakteria
Bakteria: 23 Phylum 1 Aquificae 2.Thermotogae 3. Thermodesulfobacteria 4. Deinococcus-Thermus 5. Chrysiogenetes 6. Chloroflexi 7. Thermomicrobia 8. Nitrospira
Bakteria: 23 Phylum • 9. Deferribacteres 17. Spirochaetes • 10. Cyanobacteria 18. Fibrobacteres • 11. Chlorobi 19. Acidobacteria • 12. Proteobacteria 20. Bacteroidetes • 13. Firmicutes 21. Fusobacteria • 14. Actinobacteria 22. Verrucobacteria • 15.Planctomycetes 23. Dictyoglomi • 16. Chlamydae
Phylum Actinobacteria • Classis: Actinobacteria (5 subclassis) • 1. Acidimicrobidae • 2. Rubrobacteridae • 3. Coriobacteridae • 4. Sphaerobacteridae • 5. Actinobacteridae (2 Ordo)
Subclassis Actinobacteridae 1. Ordo Actinomycetales ( 10 Sub-ordo): • 1.1. Actinomycinea ( 1 Familia; 4 genera) • 1.2. Micrococcineae (10 Familia) • 1.3. Corynebacterineae (7 Familia) • 1.4. Micromonosporineae (1 familia; 9 genera) • 1.5. Propionibacterineae (2 Familia) • 1.6. Pseudonocardineae (2 Familia) • 1.7. Streptomycineae (1 Familia; 3 genera) • 1.8. Streptosporangineae (3 Familia) • 1.9. Frankineae (6 Familia0 • 1.10. Glycomycineae (1 Familia; 1 genus) 2. Ordo Bifidobacterales
Sub-ordo: Streptomycineae • Familia:Streptomycetaceae • Genus: Streptomyces • Anggota spesies: sekitar 500 Krakterisitik Genus Streptomyces: • Memiliki hifae vegetatif dan hifa aerial yang menghasilkan rantai konidiospora yang terdiri dari 3 - 50
Paraserianthes falcatharia Homo sapiens Selective isolation of Streptomycetes from the rhizosphere of P. falcatharia.
Rantai dan ornamen spora Streptomyces indonesiensis DSM 41759T
Kode Strain (Acession Number) • S. asiaticus (A14P1 = DSM 41761 = NCIMB 13675) • S. cangkringensis (D13P3 = DSM 41769 = NCIMB 13684) • S. indonesiensis (A4R2 = DSM 41759 = NCIMB 13673) • (Dapat dilihat di Website DSMZ CC)
Kode Strain (Acession Number) • S. javensis (B22P3 = DSM 41764 = NCIMB 13679) • S. rhizosphaerius (A10P1 = DSM 41760 = NCIMB 13674) • S. yogyakartensis (C4R3 = DSM 41766 = NCIMB 13681)
Acession Number 16S rDNA • S. asiaticus DSM 41761T (AJ 391830) • S. cangkringensis DSM 41769T (AJ 391831) • S. indonesiensis DSM 41759 T(AJ 391835) • S. javensis DSM 41764T (AJ 391833) • S. rhizosphaerius DSM 41760T (AJ 391834) • S. yogyakartensis DSM 41766T (AJ 391827)
Publikasi • Draf publikasi • Kode Strain dari DSMZ dan NCIMB • Accession number of 16S rDNA seq. ↓ Int. J. General & Mol. Microbiol. Antonie van Leeuwenhoek ↓ Vol. 78 (3/4): 353 – 366 (Effective)
Validation Valid Publication: • International Journal of Systematic and evolutionary Microbiology51: 1619-1620 (2001) ↓ Approved List of Bacterial Name
Genus Aquifex Aquifex aerolicus Aquifex pyrophylus
Genus Thermotoga Habitat Thermotoga Thermotoga maritima
3. Phylum: Thermodesulfobacteria • Thermodesulfobacterium • Thermodesulfatator Thermodesulfobacterium hydrogeniphilim
4. Phylum Deinococcus-Thermus • Deinococcus • Thermus • Marinithermus • Meiothermus • Oceanithermus • Vulcanithermus Thermus aquaticus
6. PhylumChloroflexi (green nonsulfur bacteria) • Chloroflexus • Chloronema • Heliothrix • Roseiflexus • Oscillochloris • Herpetosiphon • Anaerolinea • Caldilinea Chloroflexus
7. Phylum Thermomicrobia • Thermomicrobium roseum • Thermomicrobium fosteri Thermomicroboim sp.
8. Phylum Nitrospira • Nitrospira • Leptospirillum • Magnetobacterium • Thermodesulfovibrio Habitat Leptospirillum ferrooxidans
Cyanobacteria Oscilatoria sp. Spirulina sp. Anabaena sp. Nostoc sp.
17. Phylum Spirochaetes • Spirochaetes • Borrelia • Brachyspira • Brevinema • Clevelandina • Cristispira • Diplocalyx • Hollandina • Leptonema • Leptospira • Pillotina • Serpulina • Spirochaeta • Treponema Leptospira
20. Phylum Bacteroidetes • Bacteroides: Bacteroides fragilis