Biochemistry of Extracellular Matrix

1. Biochemistry of Extracellular Matrix Jana Novotná

2. Composition of Extracellular Matrix (ECM) • Cells (mesenchymal origin) - fibroblasts - smooth muscle cells - chondroblasts - osteoblasts and epitelial cells • Organic fibrillar matrix • Organic nonfibrillar matrix • Water

3. Function of ECM • Provides support and anchorage for cells. • Regulates and determine cells dynamic behaviour : - polarity of cells - cell differentiation - adhesion - migration • Provides mechanical support for tissues and organ architecture - growth - regenerative and healing processes - determination and maintenance of the structure • Place for active exchange of different metabolites, ions, water.

4. Structure of ECM • collagen – the main ECM component, forms the main fibres • elastin • proteoglycans - heteropolysacharides • structural glycoproteins - fibronectin, laminin

5. Collagen • The most abundant protein in the body, making 25%-35% of all the whole-body proteins. • Collagen contributes to the stability of tissues and organs. • It maintains their structural integrity. • It has great tensile strenght. • The main component of fascia, cartilage, ligaments, tendons, bone and skin. • Plays an important role in cell differentiation, polarity, movement. • Plays an important role in tissue and organ development.

6. Collagen Structure • Collagen is insoluble glycoprotein (protein + carbohydrate) • Collagen polypeptide primary structure: • -G – X – A – G – A – A – G – Y – A – G – A – A – G – X – A – G− • , • G - glycine, X - proline or hydroxyproline, Y – lysin or hydroxylysine, A – amino acid • Proline and hydroxyproline constitute about 1/6 of the total sequence,provide the stifness of the polypeptide chain. • Carbohydrates : glucose, galactose

7. Three helical polypeptide units twist to form a triple-helical collagen molecule: a molecular "rope" which has some bending stiffness and does not undergo rotation. • The tropocollagen molecule has a length of approximately 300 nm and a diameter close to 1.5 nm. • In the typical fibrillar collagens, only short terminal portions of the polypeptides (the telopeptides) are not triple helical.

8. Synthesis • Synthesis of a chainsof pre-procollagen on ribosomes.  • Hydroxylationof lysine and proline in rER/Golgi by lysyl-5-hydroxylase and prolyl-4-hydroxylase. • Glycosylation: addition of galactose and glucose to some hydroxylysine residues (galactosyl transferase and glycosyl transferase). • Assembly of a-chains to form procollagen. Reaction needs the formation of disulphide bonds between registration peptides, at both ends of theprepro- collagen. 

9. HSP47 as a Specific Collagen Chaperone

10. 5. Secretion of procollagen molecules by exocytosis into theextracellular space. 6. Cleavage of registration peptides is catalysed by procollagen peptidases.The resulting molecule is called tropocollagen. 7. Oxidation – deamination of the hydroxylysine, the removal of (NH2) group has a net oxidative effect and the formation of covalent cross-links.  Reaction is catalyzed by lysine oxidase (or catalase).  8. Self-assembly or polymerization of tropocollagen molecules form collagen fibrils.Cross-linkage between adjacent tropocollagen molecules stabilizes the fibrils. 

12. Posttranslation Modification of Collagen Molecule Hydroxylation of some prolyl and lysyl residues prolyl-4-hydroxylase, lysyl-5-hydroxylase Cofactors: O2 (or superoxid) a-ketoglutarate Fe2+ vitamin C (ascorbic acid) Proline + a-ketoglutarate+ O2 + Fe2+ → 4-hydroxy-proline + Fe3+ + CO2 + succinate Hydroxyproline stabilizes molecule oftropocollagen.

13. Aldol Condensation

14. Amadori Product - Ketamine

15. Lysinonorleucine Cross-link

16. The typical staggered array of tropocollagen molecules in the collagen fibril. The telopeptides participate in covalent crosslinking.

17. Collagen – Fiber Formation Collagen types I, II, III, V, IX, X Cross striated structure of collagen fiber reflect periodic composition of individual tropocollagen molecules. Collagen fibrils of 1 mm diameter support the weight of 10 kg.

18. Collagen Interactions Fiber forming collagen and nonfibrous collagen Cartilagous matrix Tendon

19. Collagens Classification • Fibril-forming collagens (I, II, III, V, X) • Fibril-associated collagens (FACIT) • Network-forming collagens • Anchoring fibrils collagens • Transmembrane collagens • Basement membrane collagens • Other collagens with unique function

21. Major Collagen Types Fibril forming collagens (Most abundant collagen family - 90 % of the total collagens)

22. Basement membrane collagens Short non-helical amino-terminal domain, a long Gly-X-Y repeat domain with numerous small interruptions, and a highly conserved carboxyl-terminal globular NC1 domain. It polymerizes into a disulfide-bonded polygonal network via tetramerization between amino-terminal domains and dimerization between NC1 domains.

23. Elastin • Elastin is a major protein component of tissues that require elasticity such as arteries, lungs, bladder, skin and elastic ligaments and cartilage. • It is composed of soluble tropoelastin protein containing primarily glycine and valine and modified alanine and proline residues. • Tropoelastin is a ~65kDa protein that is highly cross-linked to form an insoluble complex. • Polypeptide chains are cross-linked together to form rubberlike, elastic fibers. Each elastin molecule uncoils into a more extended conformation when the fiber is stretched and will recoil spontaneously as soon as the stretching force is relaxed. Jaime Moore , Susan Thibeault Journal of Voice Volume 26, Issue 3 2012 269 - 275

24. Elastin • Desmosine (isodesmosine) - the most common interchain cross-link • conversion of NH3 groups of lysine (hydroxylisine) to reactive aldehydes by lysyl oxidase. • desmosine cross-link isspontaneously formed.

25. Proteoglycans Special class of glycoproteins heavily glycosylated (95%). Core protein with one or more attached glycosamino glycan chain(s).

26. Glycosaminoglycans (GAG) • Long chain, linear carbohydrate polymers • Negatively charged under physiological conditions (due to the occurrence of sulfate and uronic acid groups). Disaccharide subunits are: 1. uronic acid D-glucuronic acid or L-iduronic acid 2. aminosugar N-acetyl glucosamin (GlcNAc) or N-acetyl galactosamin (GalNAc)

27. Amino sugars and uronic acids are the most common building blocks of the glycosaminoglycans. • amino sugars -OH at C-2 is replaced by an amino group. This amino group is most often acetylated and sometimes sulfated. • uronic acidsC-6 of the hexose is oxidized to a carboxyl group.

28. Linkage of GAGs to protein core by specific trisaccharide linker

29. Hyaluronic Acid & Keratan Sulfate

30. Chondroitin 6-sulfate & Heparan Supfate

31. Dermatan Sulfate & Heparin

32. Biosynthesis • The protein component is synthesized by ribosomes and transocated into the lumen of the RER. • Glycosylation of the proteoglycan occurs in the Golgi apparatus in multiple enzymatic steps. • First a special link tetrasaccharide is attached to a serine side chain on the core protein to serve as a primer for polysaccharide growth.

33. Biosynthesis • Then sugars are added by glycosyltransferase. • Some glycosyltransferases catalyse sugar transfer to tyrosine, serine and threonine to give O-linked glycoproteins, or to asparagine to give N-linked glycoproteins. • Mannosyl groups may be transferred to tryptophan to generate C-manosyl tryptophan • The completed proteoglycan is then exported in secretoryvesicles to the extracellular matrix of the cell.

34. Biosynthesis of Heparan Sulfate proteoglycan

35. Degradation of Heparan Sulfate Proteoglycan

36. Glycosaminoglycan Occurence Proteoglycans can be categorised depending upon the nature of their glycosaminoglycan chains. • Hyaluronic acid (does not contain any sulfate) • non-covalent link complex with proteoglycans • Chondroitinsulfate • cartilage, bone • Dermatan sulfate • skin, blood vessels • Heparan sulfate • basement membrane, component of cells surface • Keratan sulfate • cornea, bone, cartilage, often aggregated with chondroitin sulfate

37. Function of Proteoglycans • organize water molecules - resistent to compression - return to original shape - repel negative molecules • occupy space between cells and collagen • high viscosity - lubricating fluid in the joints • specific binding to other macromolecules • link to collagen fibers - form network - in bone combine with calcium salts (calcium carbonate,hydroxyapatite) • cell migration and adhesion - passageways between cells • anchoring cells to matrix fibers

38. Structural Glycoproteins • Direct linkage to collagen or proteoglycans • anchoring collagen fibers to cell membrane • covalent attachment to membrane lipid • Major adhesive structural glycoproteins • fibronectin • laminin

39. Fibronectin • High-molecular weight (~440kDa) glycoprotein • Attached to cell membrane by membrane-spanning receptor – integrin. • Crosslinks and stabilizes other components of ECM • Enhances cell addhesion to extracellular matrix components (collagen, fibrin and heparansulfate proteoglycans). • Related to blood clotting - soluble FN crosslinks platelets together using membrane bound heparin

40. FibronectinStructure • protein dimer connected at C-terminal by S-S linkage • rigid and flexible domains • cell binding domain RGD • (Arg, Gly, Asp) • - binding receptor in cell membranes • RGD domain binds to • - collagen type I, II and III • - heparin sulfate • - hyaluronic acid • - fibrin

41. Fibronectin Function • related to cell adhesion, differentiation, growth, migration; • anchoring basal laminae to other ECM; • plasma fibronectin forms a blood cloth, along with fibrin; • related to cell movement - groups of embryonic cells follow a FN pathway -FN guides macrophages into wound areas.

42. Laminin structure • and function • cross-shapedglycoprotein • 3 polypeptide chains • domain bind • - collagen type IV • - heparin • - heparin sulfate • cell surface receptor RGD • cell adhesion • role in cell differentiation • anchoring the glycoprotein to basal laminae

44. Fibrillin • Glycoprotein, essential for formation of elastic fibers(asheath surrounding the amorphous elastin) • Produced by fibroblasts. • A group of three proteins, fibrillin-1, -2 and -3. • The main role - maintaining the structural integrity of tissues, the regulation of cytokines – TGF-b • In humans, defects in the fibrillin-1 and fibrillin-2 genes have been linked to diseases that affect the cardiovascular, skeletal and ocular systems, including Marfan syndrome.

45. Integrins • Groups of transmembrane protein receptors • mediate the attachment between a cell and its surroundings • integrins perform outside-in signaling and they also operate an inside-out mode. • Link cytoskeleton to ECM • Fibronectin receptor is best known

46. Tanescins • Abundant in the extracellular matrix of developing vertebrate embryo. • Tenascin-C contains an RGD motif and is recognized by diverse integrins. Mainly synthesized by the nervous system and connective tissues. • Tenascin-R is found in the nervous system • Tenascin-X and tenascin-Y are found primarily in muscle connective tissues. • Tenascin-W is found in kidney and developing bone.