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COOH. CH 2 OX. O. O. O. OX. OH. O. O. OX. NHY. GF. GF. Growth factor receptor. -P. P-. kinase. Signalling pathways. Cell Surface Heparan Sulfate Proteoglycans. Cells adapt structures of surface HS chains in response to their environment. A rapid method for sequencing HS
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COOH CH2OX O O O OX OH O O OX NHY GF GF Growth factor receptor -P P- kinase Signalling pathways Cell Surface Heparan Sulfate Proteoglycans Cells adapt structures of surface HS chains in response to their environment. A rapid method for sequencing HS released from proteoglycans necessary: interactions with (FGFs, TGF, HB-EGF, VEGF)
GlcA GlcNAc NA domain NS domain GlcNS6S IdoA2S • Instrumental sequencing of GAGs is required • What is the glycosaminoglycan phenotype at the molecular level?
Nascent Glycosaminoglycan Repeating Disaccharides Heparin/Heparan sulfate: -GlcA(1-4)GlcNAc(1-4)- Chondroitin sulfate: -GlcA (1-3) -GalNAc (1-4)- Keratan Sulfate: -Gal (1-4)GlcNAc (1-3)- Hyaluronan (unsulfated): -GlcA(1-3)GlcNAc (1-4)- Biosynthetic enzymes modify specific positions with sulfate, epimerize some GlcA to IdoA, and, in KS, may add monosaccharides (NeuAc, Fuc) GlcNAc GlcA IdoA Gal GalNAc
Biosynthesis of heparan sulfate GlcNAc transferase II GlcA transferase II Polymerization N-deacetylase/N-sulfotransferase Epimerization GlcA C5 epimerase 1. 2-O-sulfotransferase 2. 6-O-sulfotransferase 3. 3-O-sulfotransferase Sulfation GlcA GlcNAc GlcNS6S IdoA2S
Examples of GAG hexamers: the possible modifications at the monosaccharide level are indicated. • Chondroitin sulfate (CS) • UroA(1-3)GalNAc(1-4) • GlcA/IdoA, IdoA2S, GaNAc4S, GalNAc6S, GalNAc4S6S • Heparan sulfate (HS) • UroA(1-4)GlcNAc(1-4) • GlcA/IdoA, IdoA2S, GlcNS, GlcNS6S, GlcNS3S6S • Keratan sulfate (KS) • Gal(1-4)GlcNAc(1-3) • Gal6S, GlcNAc6S, sialylation, fucosylation
Why is GAG structure an important topic for research? • The mass spectrometric fragmentation characteristics of these highly sulfated molecules tells us a great deal about carbohydrates in general • The analysis of such fragile molecules is necessary for biochemistry/medicine to advance • Hidden biology: the functions chemical structures too fragile to analyze have been hidden to us (O-GlcNAc, sulfated CHOs, phospho-His) • GAGs are found on the surfaces of all adherent cells and mediate cell-cell and cell-matrix interactions, and as such are essential to higher eukaryotic development and play roles in diseases.