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Epigenetics. Dr Guan Yong Khee. BUILDING BLOCKS OF ALL ORGANISM…. Cells Tissue Organ Organism. Eukaryotic Animal Cell. CHROMOSOMES…. DNA - the molecule of Life. Watson and Crick deduced the structure of DNA in 1953 at the MRC unit in Cambridge.
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Epigenetics Dr Guan Yong Khee
BUILDING BLOCKS OF ALL ORGANISM… • Cells Tissue Organ Organism
Watson and Crick deduced the structure of DNA in 1953 at the MRC unit in Cambridge
Watson and Crick, with Wilkins, were awarded the Nobel Prize for Medicine in 1962
Human Genome Project • The $3-billion project was formally founded in 1990 by the US Department of Energy and the National Institutes of Health • A 'rough draft' of the genome was finished in 2000, announced jointly by U.S. President Bill Clinton and the British Prime Minister Tony Blair on June 26, 2000 • Essentially complete genome in April 2003
Epigenetics Study of changes in gene expression or cellular phenotype • caused by mechanisms other than changes in the underlying DNA sequence Epi – Greek for “over” or “on top of”
Different genes are turned on and different genes are turned off in the development of different tissues/cells
How can cells do that? • By a few postulated mechanisms • Mainly • DNA methylation • Histone modification
DNA methylation • Highly methylated areas tend to be less transcriptionally active
Mechanism • Post translational modification of Histone proteins
Post translational modification of Histone proteins Modifications include: • Acetylation • Methylation • Ubiquitylation • Phosphorylation • Sumoylation Acetylation is the most highly studied of these modifications
Epigenetics in Cancer and Haematology • Aberrant DNA methylation is associated with unscheduled gene silencing • Hypermethylation repress transcription via promoter region of tumour suppressor genes
Hypomethylating agents • Decitabine • 5-azacytidine • Cytarabine Currently used in treatment of Myelodysplastic Syndromes and AML
Histone deacetylase inhibitors • Vorinostat • Romidepsin • Panobinostat • Valproic Acid Currently used in treatment of certain lymphomas
Questions remains • How to control which switches to turn on and which ones to turn off?