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Foldfinder Web Server

Foldfinder Web Server. 인실리코 단백질 연구단 최인실 flypani@kias.re.kr. 목차. 1. Foldfinder Web Server 소개 2. 사용법 3. Example 4. DB 상세. FoldFinder Web Server. A web server for protein fold recognition based on profile-profile alignment using predicted secondary structure

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Foldfinder Web Server

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  1. Foldfinder Web Server 인실리코 단백질 연구단 최인실 flypani@kias.re.kr

  2. 목차 • 1. Foldfinder Web Server 소개 • 2. 사용법 • 3. Example • 4. DB 상세

  3. FoldFinder Web Server • A web server for protein fold recognition based on profile-profile alignment using predicted secondary structure • http://lee.kias.re.kr/~newton/ffinder/index.html

  4. 사용법 1. Select DB 2. Job Name 3. E-mail 4. Sequence 5. Submit 6. Get e-mail 7. Get files

  5. Example : select DB

  6. Example : Job Name

  7. Example : E-mail

  8. Example : Sequence * single sequence * multi sequence

  9. 사용법 : example

  10. 사용법 : example

  11. 사용법 : example

  12. 사용법 : example

  13. PDB.ORG DB 상세 data, derived_data / week LEE pdb cluster95 pdb info List • method • resolution • … fas dssp structure profile ss3 ck2 ck2 scop Binary : DB

  14. PDB.ORG DB 상세 data, derived_data / week LEE pdb Makeinfo.py cluster95 pdb info make_list List • method • resolution • … Step1.sh fas dssp structure Step2.sh profile Make_ss3.sh Make_ck2.sh Get_scinf.sh ss3 ck2 ck2 scop Chk2bin.f90 binary

  15. 감사합니다.

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