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Biology Design Studies

Biology Design Studies. comparative functional genomics Pathline comparative genomics (synteny) MizBee gene expression + interaction network Cerebral. Tamara Munzner, UBC, http://www.cs.ubc.ca/~tmm. General Design Studies. large-scale system monitoring LiveRAC web logs SessionViewer

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Biology Design Studies

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  1. Biology Design Studies • comparative functional genomics • Pathline • comparative genomics (synteny) • MizBee • gene expression + interaction network • Cerebral Tamara Munzner, UBC, http://www.cs.ubc.ca/~tmm

  2. General Design Studies • large-scale system monitoring • LiveRAC • web logs • SessionViewer • computational linguistics • Constellation Tamara Munzner, UBC, http://www.cs.ubc.ca/~tmm

  3. Dimensionality Reduction • visual dimensional analysis and reduction toolkit • DimStiller • GPU accelerated MDS • Glimmer • steerable MDS • MDSteer Tamara Munzner, UBC, http://www.cs.ubc.ca/~tmm

  4. User Studies • overview use • stretch and squish vs. pan/zoom navigation • separate vs. integrated views • impact of distortion on visual search, visual memory • 2D points vs. 3D landscapes Tamara Munzner, UBC, http://www.cs.ubc.ca/~tmm

  5. Graph/Tree Vis • general multilevel graphs • layout • TopoLayout • interaction • Grouse, GrouseFlocks, TugGraph • evolutionary tree comparison • TreeJuxtaposer • 3D hyperbolic graphs • H3 Tamara Munzner, UBC, http://www.cs.ubc.ca/~tmm

  6. Theory/Models • nested model for design and validation • papers process and pitfalls

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