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Transcription Translation

Transcription Translation. Gene expression. - process by which DNA directs protein synthesis two stages :. transcription and translation. Figure 14.UN01. Central Dogma. Protein. RNA. DNA. Gene expression. Differences Between DNA and RNA. Prokaryotes. Figure 14.4a-2.

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Transcription Translation

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  1. Transcription Translation

  2. Gene expression • -process by which DNA directs protein synthesis • two stages: transcription and translation

  3. Figure 14.UN01 Central Dogma Protein RNA DNA Gene expression

  4. Differences Between DNA and RNA

  5. Prokaryotes Figure 14.4a-2 • translation of mRNA can begin before transcription has finished DNA TRANSCRIPTION mRNA Ribosome TRANSLATION Polypeptide (a) Bacterial cell

  6. Figure 14.4b-3 Eukaryotes Nuclear envelope DNA TRANSCRIPTION • -the nuclear envelope separates transcription from translation; mRNA must be transported out of the nucleus to be translated • Eukaryotic RNA transcripts are modified through RNA processing to yield the finished mRNA Pre-mRNA RNA PROCESSING mRNA TRANSLATION Ribosome Polypeptide Overview: http://www.pbslearningmedia.org/asset/lsps07_int_celltrans/ (b) Eukaryotic cell

  7. Figure 14.5 DNA template strand 3 5 C A C A C A A C G A G T T G T G G T T G C T C A 5 3 TRANSCRIPTION G U U G C U C G U G U A mRNA 3 5 Codon TRANSLATION Protein Gly Ser Trp Phe Amino acid

  8. Figure 14.6 Genetic Code Second mRNA base A U G C UUU UCU UAU UGU U Phe Tyr Cys UUC UCC UAC UGC C U Ser Stop Stop UUA UCA UAA UGA A Leu Stop UUG UCG UAG UGG G Trp CUU CCU CAU CGU U His CUC CCC CAC CGC C 64 codons; 20 amino acids The genetic code is redundant: more than one codon may specify a particular amino acid C Leu Pro Arg CUA CCA CAA CGA A Gln CUG CCG CAG CGG G First mRNA base (5 end of codon) Third mRNA base (3 end of codon) AUU ACU AAU AGU U Ser Asn IIe AUC ACC AAC AGC C A Thr AUA ACA AAA AGA A Lys Arg Met or start AUG ACG AAG AGG G GUU GCU GAU GGU U Asp GUC GCC C GAC GGC G Ala Gly Val GUA GCA GAA GGA A Glu GUG GCG GAG GGG G

  9. Universal Genetic Code Figure 14.7 (b) Pig expressing a jellyfish gene (a) Tobacco plant expressing a firefly gene

  10. Figure 14.10 Transcription Nontemplate strand of DNA RNA nucleotides RNA polymerase RNA polymerase assembles 5’ to 3’ -can start a chain without a primer C C A A T A 5 T 3 U T C 3 end G T U A G C A C U A C C A C A A 5 3 T T T A G G 5 Direction of transcription Template strand of DNA Newly made RNA

  11. Figure 14.8-3 1 2 3 Transcription unit Prokaryotes Promoter 5 3 3 5 Start point RNA polymerase Initiation 5 3 5 3 Template strand of DNA Unwound DNA RNA transcript Elongation Rewound DNA 5 3 3 5 3 5 Direction of transcription (“downstream”) RNA transcript Termination 5 3 5 3 3 5 Completed RNA transcript http://www.stolaf.edu/people/giannini/flashanimat/molgenetics/transcription.swf

  12. Figure 14.9 1 2 3 Eukaryotes Promoter Nontemplate strand Transcription factors mediate the binding of RNA polymerase and the initiation of transcription DNA 5 3 T A T A A A A 3 5 A T A T T T T A eukaryotic promoter TATA box Start point Template strand Transcription factors 5 3 Several transcription factors bind to DNA. 3 5 RNA polymerase II Transcription factors Transcription initiation complex forms. 5 3 3 5 3 5 RNA transcript Transcription initiation complex

  13. Figure 14.UN03 Eukaryotic cells modify RNA after transcription DNA TRANSCRIPTION Pre-mRNA RNA PROCESSING mRNA Ribosome TRANSLATION Polypeptide

  14. Figure 14.11 RNA Processing 50–250 adenine nucleotides added to the 3 end A modified guanine nucleotide added to the 5 end Polyadenylation signal Protein-coding segment 3 5 AAUAAA AAA AAA G P P P … • Modifications: • The 5 end receives a modified G nucleotide 5 cap • The 3 end gets a poly-A tail • Functions: • Facilitating the export of mRNA to the cytoplasm • Protecting mRNA from hydrolytic enzymes • Helping ribosomes attach to the 5 end Start codon Stop codon Poly-A tail 5 UTR 5 Cap 3 UTR

  15. Figure 14.12 Alternative RNA Splicing Pre-mRNA Intron Intron Poly-A tail 5 Cap 1–30 105– 146 31–104 Introns cut out and exons spliced together mRNA 5 Cap Poly-A tail 1–146 3 UTR 5 UTR Coding segment RNA splicing removes introns (noncoding) and joins exons (translates to amino acids), creating an mRNA molecule with a continuous coding sequence AAUAAA

  16. Figure 14.14 Translation Amino acids Polypeptide tRNA with amino acid attached A cell translates 
an mRNA message 
into protein with the help of 
transfer RNA (tRNA) Ribosome Trp Gly Phe tRNA C C C Anticodon C G A A A A U G G U U U G G C Codons 5 3 mRNA

  17. Figure 14.15 tRNA 3 A Amino acid attachment site C C 5 A Amino acid attachment site G C C G 5 C G G U 3 U A A U A U U C G * G A U C * A A C A C * C U G * Hydrogen bonds U U G G G * G C A G C * * C G A G U * * G A C G Hydrogen bonds C G U A * G A * A C G A A * U 3 5 A G A Anticodon Anticodon Anticodon (b) Three-dimensional structure (c) Symbol used in this book (a) Two-dimensional structure

  18. Figure 14.17 Growing polypeptide Exit tunnel Ribosome Structure tRNA molecules Large subunit E P A Small subunit 5 3 mRNA (a) Computer model of functioning ribosome Growing polypeptide P site (Peptidyl-tRNA binding site) Amino end Exit tunnel Next amino acid to be added to polypeptide chain A site (Aminoacyl- tRNA binding site) E site (Exit site) E tRNA E P A Large subunit mRNA 3 mRNA binding site Small subunit Codons 5 (c) Schematic model with mRNA and tRNA (b) Schematic model showing binding sites

  19. Figure 14.18 P i 1 2 initiation Large ribosomal subunit • 3 stages: • Initiation • Elongation • Termination 3 5 U C A P site Met Met 3 5 A G U Initiator tRNA  GDP GTP E A mRNA 5 5 3 3 Start codon Small ribosomal subunit Translation initiation complex mRNA binding site Small ribosomal subunit binds to mRNA. Large ribosomal subunit completes the initiation complex. http://www.stolaf.edu/people/giannini/flashanimat/molgenetics/translation.swf http://www.pbslearningmedia.org/asset/lsps07_int_celltrans/

  20. Figure 14.19-3 1 P i 2 P i 3 Elongation Amino end of polypeptide Codon recognition E 3 mRNA Ribosome ready for next aminoacyl tRNA A site P site GTP 5 GDP  E E P A P A Peptide bond formation GDP  Translocation GTP E P A

  21. Figure 14.20-3 P i 2 1 3 Termination Release factor Free polypeptide 5 3 3 3 5 5 GTP 2 Stop codon (UAG, UAA, or UGA) 2 GDP  Release factor promotes hydrolysis. Ribosome reaches a stop codon on mRNA. Ribosomal subunits and other components dissociate.

  22. Figure 14.22 polyribosomes Completed polypeptide Growing polypeptides Incoming ribosomal subunits Polyribosome Start of mRNA (5 end) End of mRNA (3 end) A number of 
ribosomes can 
translate a 
single mRNA 
molecule 
simultaneously (a) Several ribosomes simultaneously translating one mRNA molecule Ribosomes mRNA (b) A large polyribosome in a bacterial cell (TEM) 0.1 m

  23. Figure 14.24 Review DNA TRANSCRIPTION 3 Poly-A RNA polymerase 5 RNA transcript Exon RNA PROCESSING RNA transcript (pre-mRNA) Aminoacyl-tRNA synthetase Intron Poly-A NUCLEUS Amino acid AMINO ACID ACTIVATION tRNA CYTOPLASM mRNA 3 5Cap A Aminoacyl (charged) tRNA Poly-A P E Ribosomal subunits http://www.pbslearningmedia.org/asset/lsps07_int_celltrans/ 5Cap TRANSLATION C C U A A C E A Anticodon A A A U U U U A U G G G Codon Ribosome

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