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Drawing Organic Compounds. SCH4U0. Organic Molecules. Organic compounds are mainly composed of carbon and hydrogen Carbon forms the main backbone of the compound, with (usually) several hydrogen atoms bonded to each carbon.
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Drawing Organic Compounds SCH4U0
Organic Molecules • Organic compounds are mainly composed of carbon and hydrogen • Carbon forms the main backbone of the compound, with (usually) several hydrogen atoms bonded to each carbon. • There are also other atoms (mostly non-metals) like S, O, N, P, Cl, etc… • Living things are largely composed of organic molecules • Sugars and carbohydrates, DNA, proteins, etc… • There are also several useful synthetic organic compounds • Medicines, polymers (polyester, PVC, fiberglass, etc…)
Organic Molecules • Organic molecules have a huge range in size • From one carbon long to over 1 million carbons long • Because of this, it is very inconvenient to represent these molecules using conventional Lewis diagrams • They get very cramped and confusing, even when there are 5-6 carbons • Especially when shown in 3D
Drawing Organic Molecules • To get around this, we have two simpler ways of drawing these compounds; • Condensed structural diagrams • Skeleton diagrams • Both of these methods rely on our knowledge of carbons basic properties • Always forms 4 bonds to fill its octet
Condensed Structural Diagrams • These diagrams simplify the drawings because they group together each carbon with the hydrogen atoms attached to it • The bonds are sometimes shown, but not always • Eg: = or • Benefits: • Much simpler, and easy to read • Bond angles between the carbons can be shown fairly easily CH3CH2CH2CH2CH3
Condensed Structural Diagrams • Try drawing the following molecules using condensed structural diagrams
Skeleton Diagrams • These diagrams are very simplified • All carbon – carbon BONDS are shown, but not the atoms • All hydrogen atoms bonded to carbon are NOT shown • Any other atoms/bonds ARE shown • Eg: = • Each line has 1 carbon at each end (except if there is an atom drawn at the end of the line like O) • It is assumed that you know how many H must be on each C
Skeleton Diagrams • Try drawing the following molecules in skeleton diagrams
Organic Molecules • What is the chemical formula of the following molecules?
Isomers • Isomers are different compounds with the same chemical formula • There are two types of isomers • Structural isomers • Stereoisomers • Two different isomers, even though they have the same formula, can have very different properties BP = - 24ºC Used as Refrigerant BP = 78.4 ºC Recreational Drug
Structural Isomers • Molecules that have the same formula, but the atoms are not bonded in the same pattern • Eg: • The atoms are bonded in a different way, and this gives the molecules different properties from one another (intermolecular forces, interaction with enzymes, etc…) ethanol methoxymethane
Structural Isomers? • Which of the following pairs are structural isomers of one another? and and and
Structural Isomers • Draw as many structural isomers of as you can Same molecule
Stereoisomers • Molecules that have the same chemical formula and bonding pattern, but the specific arrangement of groups is different • There are two types of stereoisomers that we will discuss • Cis/trans (Z/E) isomers • Enantiomers
Cis/Trans Isomers • Single bonds are allowed to rotate without breaking any bonds • Double bonds cannot, or else the pi bonds will break • That means that: These are all the same molecule These are different molecules
Cis/Trans Isomers • We give cis/trans or Z/E labels to denote the arrangement of groups around the double bond • If the two highest atomic number groups (one from each carbon) are close, we call it “cis” or “Z”. • If the two highest atomic number groups (one from each carbon) are far apart, we call it “trans” or “E”. Cis (Z) Trans (E)
Cis/Trans Isomers • Label the following molecules as cis, trans, or neither. Cis (Z) Cis (Z) Trans (E) Trans (E) neither neither
Enantiomers • Enantiomers are two different compounds that are exact mirror images of one another. • A compound can have an enantiomer if it contains a chiral carbon • Chiral carbon atoms are bonded to four different groups Eg: Enantiomers Not Chiral has no enantiomer Chiral
Enantiomers • Determine whether or not the following molecules have chiral carbons or not • If they do, draw the enantiomer of the compound Not Chiral Not Chiral